RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 TCTN1Q2MV58 587 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 LEXMQ3ZCV2 418 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 TICAM2Q86XR7 235 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 GJD3Q8N144 294 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 UIMC1Q96RL1 719 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 C11orf16Q9NQ32 467 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 PXMP2Q9NR77 195 aa17.76■□□□□ 0.43
ACTN4-211ENST00000589528 MUC6Q6W4X9 2439 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.75■□□□□ 0.43
ACTN4-211ENST00000589528 SORBS3O60504 671 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 KDM4AO75164 1064 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
ACTN4-211ENST00000589528 THPOP40225 353 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 NT5C2P49902 561 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
ACTN4-211ENST00000589528 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 PTCRAQ6ISU1 281 aaPredicted RBP17.75■□□□□ 0.43
ACTN4-211ENST00000589528 EP400NLQ6ZTU2 488 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 FAM178BQ8IXR5 827 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 SPATA33Q96N06 139 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 C17orf80Q9BSJ5 609 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 CD320Q9NPF0 282 aa17.75■□□□□ 0.43
ACTN4-211ENST00000589528 KAT6AQ92794 2004 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 PRR33A8MZF0 331 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 HAS3O00219 553 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 KCNV1Q6PIU1 500 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■□□□ 12.8
ACTN4-211ENST00000589528 YME1L1Q96TA2 773 aa17.74■□□□□ 0.43
ACTN4-211ENST00000589528 PPFIA4O75335 1185 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 ALADP13716 330 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 IL9P15248 144 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 TRIM71Q2Q1W2 868 aaKnown RBP17.73■□□□□ 0.43
ACTN4-211ENST00000589528 PUS10Q3MIT2 529 aaKnown RBP17.73■□□□□ 0.43
ACTN4-211ENST00000589528 TIGD5Q53EQ6 642 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.73■□□□□ 0.43
ACTN4-211ENST00000589528 WNT8BQ93098 351 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 MRPL38Q96DV4 380 aaKnown RBP17.73■□□□□ 0.43
ACTN4-211ENST00000589528 SAMD11Q96NU1 681 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
ACTN4-211ENST00000589528 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
ACTN4-211ENST00000589528 C17orf102A2RUQ5 167 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 B4E1Z4 1266 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 GGPS1O95749 300 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 MBTPS1Q14703 1052 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
ACTN4-211ENST00000589528 TRAF7Q6Q0C0 670 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 ATP6V0A1Q93050 837 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 UBAC1Q9BSL1 405 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 JMJD4Q9H9V9 463 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 FAM50BQ9Y247 325 aa17.72■□□□□ 0.43
ACTN4-211ENST00000589528 UPP2O95045 317 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 HSD17B4P51659 736 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 HSDL1Q3SXM5 330 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 EPC2Q52LR7 807 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 SERINC5Q86VE9 423 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 ENAHQ8N8S7 591 aaPredicted RBP17.71■□□□□ 0.43
ACTN4-211ENST00000589528 SEPT8Q92599 483 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 RALGAPA2Q2PPJ7 1873 aa17.71■□□□□ 0.43
ACTN4-211ENST00000589528 H3BQ06 376 aaPredicted RBP17.7■□□□□ 0.42
ACTN4-211ENST00000589528 NOP56O00567 594 aaKnown RBP17.7■□□□□ 0.42
ACTN4-211ENST00000589528 HTRA4P83105 476 aaPredicted RBP17.7■□□□□ 0.42
ACTN4-211ENST00000589528 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
ACTN4-211ENST00000589528 BANK1Q8NDB2 785 aa17.7■□□□□ 0.42
ACTN4-211ENST00000589528 DIAPH3Q9NSV4 1193 aa17.7■□□□□ 0.42
ACTN4-211ENST00000589528 MAP3K20Q9NYL2 800 aaKnown RBP17.7■□□□□ 0.42
ACTN4-211ENST00000589528 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
ACTN4-211ENST00000589528 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
ACTN4-211ENST00000589528 MYO7AQ13402 2215 aa17.7■□□□□ 0.42
ACTN4-211ENST00000589528 DOCK5Q9H7D0 1870 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 GRXCR2A6NFK2 248 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 H3BRB1 525 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 CTSHP09668 335 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 TGFB3P10600 412 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 HOXD8P13378 290 aaPredicted RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 SDSP20132 328 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 UBA1P22314 1058 aaKnown RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 CCND2P30279 289 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 GPM6BQ13491 265 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 PGM5Q15124 567 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 IMMTQ16891 758 aaKnown RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 PLEKHG4Q58EX7 1191 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 ALYREFQ86V81 257 aaKnown RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 ANKS1AQ92625 1134 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 KRT23Q9C075 422 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 TUT1Q9H6E5 874 aaKnown RBP17.69■□□□□ 0.42
ACTN4-211ENST00000589528 ZSWIM5Q9P217 1185 aa17.69■□□□□ 0.42
ACTN4-211ENST00000589528 H3BNC9 293 aa17.68■□□□□ 0.42
ACTN4-211ENST00000589528 RBAK-RBAKDNI3L0D1 243 aa17.68■□□□□ 0.42
ACTN4-211ENST00000589528 ZBTB5O15062 677 aa17.68■□□□□ 0.42
ACTN4-211ENST00000589528 RGS20O76081 388 aa17.68■□□□□ 0.42
ACTN4-211ENST00000589528 SMIM10L2AP0DMW4 78 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms