RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 CUL5Q93034 780 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 EMID1Q96A84 441 aaPredicted RBP11.34□□□□□ -0.59
PTPN2-208ENST00000589216 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 UBE2OQ9C0C9 1292 aaKnown RBP11.34□□□□□ -0.59
PTPN2-208ENST00000589216 TRPV6Q9H1D0 765 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 RIC8AQ9NPQ8 531 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 PDRG1Q9NUG6 133 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 RTEL1Q9NZ71 1219 aa11.34□□□□□ -0.59
PTPN2-208ENST00000589216 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 ZEB2O60315 1214 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 CABYRO75952 493 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 IFNAR1P17181 557 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 ITGB5P18084 799 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
PTPN2-208ENST00000589216 AK2P54819 239 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 ANAPC15P60006 121 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 C9orf50Q5SZB4 431 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 MTG1Q9BT17 334 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-208ENST00000589216 SLC26A6Q9BXS9 759 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 ALDH8A1Q9H2A2 487 aaPredicted RBP11.33□□□□□ -0.6
PTPN2-208ENST00000589216 TRMT13Q9NUP7 481 aaKnown RBP11.33□□□□□ -0.6
PTPN2-208ENST00000589216 TMEM39AQ9NV64 488 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 PRKAG2Q9UGJ0 569 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 TPCN1Q9ULQ1 816 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 PCDHA6Q9UN73 950 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 PCDHA8Q9Y5H6 950 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
PTPN2-208ENST00000589216 GBF1Q92538 1859 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 CCDC196A0A1B0GTZ2 297 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 SMCO2A6NFE2 343 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 SPDYE3A6NKU9 549 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 SPATA31C2B4DYI2 1134 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 hCG_1984214I3L0E3 225 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 PRPF3O43395 683 aaKnown RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 F2P00734 622 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 HOXD8P13378 290 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 ICAM3P32942 547 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 CHMP4BP1P59074 171 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 SCRN1Q12765 414 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 ZNF713Q8N859 430 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 PPTC7Q8NI37 304 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 CTAGE1Q96RT6 745 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 RNF26Q9BY78 433 aaPredicted RBP11.32□□□□□ -0.6
PTPN2-208ENST00000589216 WNT8AQ9H1J5 351 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 VPS54Q9P1Q0 977 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 SIP14410 1827 aa11.32□□□□□ -0.6
PTPN2-208ENST00000589216 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 ESYT2A0FGR8 921 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 FIBPO43427 364 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 ATP9AO75110 1047 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 CYP2C9P11712 490 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 RAG1P15918 1043 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 CYP2C18P33260 490 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 SP4Q02446 784 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 HIC1Q14526 733 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 CYFIP1Q7L576 1253 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 TET1Q8NFU7 2136 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 CYP2W1Q8TAV3 490 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 CRYGNQ8WXF5 182 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 ZNF274Q96GC6 653 aaPredicted RBP11.31□□□□□ -0.6
PTPN2-208ENST00000589216 SPATA33Q96N06 139 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
PTPN2-208ENST00000589216 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 PTPRSQ13332 1948 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
PTPN2-208ENST00000589216 HAS3O00219 553 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
PTPN2-208ENST00000589216 STAM2O75886 525 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 TIMP1P01033 207 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 TGFB3P10600 412 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 CSF2RAP15509 400 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 KCNA2P16389 499 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 SREBF1P36956 1147 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 FPGSQ05932 587 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 SHHQ15465 462 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 NPY5RQ15761 445 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 DGKDQ16760 1214 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 BRDTQ58F21 947 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms