RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TRIM9Q9C026 710 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 ARFGAP3Q9NP61 516 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 LRWD1Q9UFC0 647 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 SERPINB13Q9UIV8 391 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MYO3BQ8WXR4 1341 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 PVALEFA0A1B0GWK0 134 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 KLRG2A4D1S0 409 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PPEF1O14829 653 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PDHBP11177 359 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 ZSCAN20P17040 1043 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 TRIM21P19474 475 aaKnown RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CYLC1P35663 651 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 TBC1D8BQ0IIM8 1120 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 ZNF211Q13398 564 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 KRT79Q5XKE5 535 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 RAD9BQ6WBX8 426 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 P2RX5Q93086 422 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CCDC17Q96LX7 622 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PIGSQ96S52 555 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 TUBGCP2Q9BSJ2 902 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 BIN2Q9UBW5 565 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 POLLQ9UGP5 575 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CDC23Q9UJX2 597 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CAPN11Q9UMQ6 739 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 EPN1Q9Y6I3 576 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PLIN4Q96Q06 1357 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PP2D1A8MPX8 630 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 ERLIN1O75477 346 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 GCFC2P16383 781 aaKnown RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 TXKP42681 527 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 MTIF2P46199 727 aaKnown RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CHMP4BP1P59074 171 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PSMD2Q13200 908 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 GPS2Q13227 327 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 MTF1Q14872 753 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 SEPT2Q15019 361 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 TEX35Q5T0J7 233 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 MCTP2Q6DN12 878 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 POTEHQ6S545 545 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 SRGAP1Q7Z6B7 1085 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 ANKMY2Q8IV38 441 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CCDC170Q8IYT3 715 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 CUL5Q93034 780 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 PLIN2Q99541 437 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 NAPGQ99747 312 aaPredicted RBP8.25□□□□□ -1.09
ZNF540-206ENST00000589117 HAUS4Q9H6D7 363 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 LRRC4BQ9NT99 713 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 ATP6V0A2Q9Y487 856 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 DAGLAQ9Y4D2 1042 aa8.25□□□□□ -1.09
ZNF540-206ENST00000589117 THSD7AQ9UPZ6 1657 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 KRT86O43790 486 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 KLRC4O43908 158 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 PRMT3O60678 531 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 KIF20AO95235 890 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 NDUFA10O95299 355 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 PICALMQ13492 652 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 PPP4R3AQ6IN85 833 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 TTI2Q6NXR4 508 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 TXLNBQ8N3L3 684 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 MRPL44Q9H9J2 332 aaKnown RBP8.24□□□□□ -1.09
ZNF540-206ENST00000589117 NAV1Q8NEY1 1877 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 LY75O60449 1722 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 ADAMTS3O15072 1205 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 SNHG28P0DPA3 235 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 SRGNP10124 158 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 NPR1P16066 1061 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 BRD3Q15059 726 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 HHIPL2Q6UWX4 724 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 LARP4BQ92615 738 aaKnown RBP8.24□□□□□ -1.09
ZNF540-206ENST00000589117 TEKT1Q969V4 418 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 DNAJC7Q99615 494 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 TSG101Q99816 390 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
ZNF540-206ENST00000589117 UBA5Q9GZZ9 404 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 NT5C3AQ9H0P0 336 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 GBP3Q9H0R5 595 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 RIC8AQ9NPQ8 531 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 USP40Q9NVE5 1235 aa8.24□□□□□ -1.09
ZNF540-206ENST00000589117 TNRC6CQ9HCJ0 1690 aaKnown RBP8.24□□□□□ -1.09
ZNF540-206ENST00000589117 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 ABCB11O95342 1321 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 TTC26A0AVF1 554 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 CCDC151A5D8V7 595 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 SLC26A4O43511 780 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 COBLO75128 1261 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 MCM3P25205 808 aa8.23□□□□□ -1.09
ZNF540-206ENST00000589117 PDE6BP35913 854 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms