RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 ETNPPLQ8TBG4 499 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 SMARCE1Q969G3 411 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 PAGE5Q96GU1 130 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 IWS1Q96ST2 819 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 NT5C3AQ9H0P0 336 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 DISC1Q9NRI5 854 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 PFASO15067 1338 aa11.82□□□□□ -0.52
CHMP1B-202ENST00000588284 IGLV3-22A0A075B6J6 115 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 MSH4O15457 936 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 HSPA6P17066 643 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 CCND2P30279 289 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 INHBEP58166 350 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 NLRP12P59046 1061 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 CCNA1P78396 465 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 E2F4Q16254 413 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 NLRX1Q86UT6 975 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 TRIML1Q8N9V2 468 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 SHCBP1Q8NEM2 672 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 DNERQ8NFT8 737 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 RIT2Q99578 217 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 PDCD2LQ9BRP1 358 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 WDR11Q9BZH6 1224 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 RBSNQ9H1K0 784 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 MROH8Q9H579 483 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 JADE2Q9NQC1 790 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 PXMP2Q9NR77 195 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 CYP39A1Q9NYL5 469 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 STK17AQ9UEE5 414 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 ADD3Q9UEY8 706 aaKnown RBP11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 PCDHA5Q9Y5H7 936 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 FRMPD4Q14CM0 1322 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
CHMP1B-202ENST00000588284 MANSC4A6NHS7 340 aaPredicted RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 PDHXO00330 501 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 NR3C2P08235 984 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 CDC25AP30304 524 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 DEKP35659 375 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 PGM5Q15124 567 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 NT5DC1Q5TFE4 455 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 SLC30A10Q6XR72 485 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 VSIG10LQ86VR7 867 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 NCAPG2Q86XI2 1143 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 SNX29Q8TEQ0 813 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 SLC5A5Q92911 643 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 CCDC47Q96A33 483 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 LENG9Q96B70 501 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 CDHR1Q96JP9 859 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 GSDMAQ96QA5 445 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 ZNF577Q9BSK1 485 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 MOV10L1Q9BXT6 1211 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 A1CFQ9NQ94 594 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 BMP2KQ9NSY1 1161 aaPredicted RBP11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 TBC1D22BQ9NU19 505 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 DACH1Q9UI36 760 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 RLFQ13129 1914 aa11.8□□□□□ -0.52
CHMP1B-202ENST00000588284 A0A087X0B3 334 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 TESPA1A2RU30 521 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 BTBD19C9JJ37 291 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 POTEB2H3BUK9 544 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 CNMDO75829 334 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 MUTP22033 750 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 CCT6AP40227 531 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 AFMP43652 599 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 SARSP49591 514 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 ZNF157P51786 506 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 UBXN2AP68543 259 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 PNOCQ13519 176 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 HYIQ5T013 277 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 LRCH2Q5VUJ6 765 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 RGMBQ6NW40 437 aa11.79□□□□□ -0.52
CHMP1B-202ENST00000588284 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms