RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 CCDC155Q8N6L0 562 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 PIBF1Q8WXW3 757 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 ANKS1AQ92625 1134 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 IWS1Q96ST2 819 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 SLC9A7Q96T83 725 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 DSCC1Q9BVC3 393 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 AMNQ9BXJ7 453 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 KRT23Q9C075 422 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 IL25Q9H293 177 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 OSBPL3Q9H4L5 887 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 PXMP2Q9NR77 195 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 CTNNA3Q9UI47 895 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 DDX41Q9UJV9 622 aaKnown RBP7.47□□□□□ -1.21
SDF2-205ENST00000587629 MTUS1Q9ULD2 1270 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 MTCH2Q9Y6C9 303 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 MUC3AQ02505 3323 aa7.47□□□□□ -1.21
SDF2-205ENST00000587629 TTC28Q96AY4 2481 aa7.46□□□□□ -1.21
SDF2-205ENST00000587629 MYO9BQ13459 2157 aa7.46□□□□□ -1.21
SDF2-205ENST00000587629 HIP1O00291 1037 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 SNPHO15079 494 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 NBNO60934 754 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 RGS20O76081 388 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 CKBP12277 381 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 COL9A1P20849 921 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 WDR5P61964 334 aaKnown RBP7.46□□□□□ -1.22
SDF2-205ENST00000587629 DEFB103AP81534 67 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 MFSD10Q14728 455 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 KIAA0753Q2KHM9 967 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 LRRC8DQ7L1W4 858 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 IL31RAQ8NI17 732 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 PHOSPHO2Q8TCD6 241 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 AFAP1L1Q8TED9 768 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 WNT8BQ93098 351 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 SPATA33Q96N06 139 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 BCAS3Q9H6U6 928 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 CNNM2Q9H8M5 875 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 SENP2Q9HC62 589 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 MAD2L2Q9UI95 211 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 PCDHA1Q9Y5I3 950 aa7.46□□□□□ -1.22
SDF2-205ENST00000587629 IFIT3O14879 490 aaKnown RBP7.45□□□□□ -1.22
SDF2-205ENST00000587629 ZBTB5O15062 677 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 BAIAP3O94812 1187 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 GGPS1O95749 300 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 BMP1P13497 986 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 HSD17B4P51659 736 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 SP2Q02086 613 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 PTH1RQ03431 593 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 GRB10Q13322 594 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 AAMPQ13685 434 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 HIC1Q14526 733 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 PGM5Q15124 567 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 SEC23AQ15436 765 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 SLC35G1Q2M3R5 365 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 HSDL1Q3SXM5 330 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 ZNF618Q5T7W0 954 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 SESTD1Q86VW0 696 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 PPTC7Q8NI37 304 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 CAGE1Q8TC20 777 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 GDPD5Q8WTR4 605 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
SDF2-205ENST00000587629 PIGSQ96S52 555 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 PDCD2LQ9BRP1 358 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 TAF6LQ9Y6J9 622 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 SCN10AQ9Y5Y9 1956 aa7.45□□□□□ -1.22
SDF2-205ENST00000587629 PALM3A6NDB9 673 aaPredicted RBP7.44□□□□□ -1.22
SDF2-205ENST00000587629 GCOM1H8Y6P7 765 aaPredicted RBP7.44□□□□□ -1.22
SDF2-205ENST00000587629 HAS3O00219 553 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 PPFIA4O75335 1185 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 F2P00734 622 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 POLR2MP0CAP2 368 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 GSPT1P15170 499 aaKnown RBP7.44□□□□□ -1.22
SDF2-205ENST00000587629 UBA1P22314 1058 aaKnown RBP7.44□□□□□ -1.22
SDF2-205ENST00000587629 PDE4AP27815 886 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 THPOP40225 353 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 TRDNQ13061 729 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 PTK7Q13308 1070 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 IKBKEQ14164 716 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 MBTPS1Q14703 1052 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 AAK1Q2M2I8 961 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 CELF3Q5SZQ8 465 aaKnown RBP7.44□□□□□ -1.22
SDF2-205ENST00000587629 CNKSR3Q6P9H4 555 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.44□□□□□ -1.22
SDF2-205ENST00000587629 STOX1Q6ZVD7 989 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 VSIG10LQ86VR7 867 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 EMID1Q96A84 441 aaPredicted RBP7.44□□□□□ -1.22
SDF2-205ENST00000587629 KATNAL1Q9BW62 490 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 MAF1Q9H063 256 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 MLXIPQ9HAP2 919 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 RTEL1Q9NZ71 1219 aa7.44□□□□□ -1.22
SDF2-205ENST00000587629 TET1Q8NFU7 2136 aa7.43□□□□□ -1.22
SDF2-205ENST00000587629 TRANK1O15050 2925 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms