RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	STXBP3	O00186	592 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	TIMP1	P01033	207 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	IFNAR1	P17181	557 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	CDC27	P30260	824 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	ICAM3	P32942	547 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	IRX5	P78411	483 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	FUT2	Q10981	343 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	MTMR1	Q13613	665 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	CELF3	Q5SZQ8	465 aa	Known RBP	13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	METTL7B	Q6UX53	244 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	REXO1	Q8N1G1	1221 aa	Known RBP	13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	COPS5	Q92905	334 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	BAD	Q92934	168 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SENP7	Q9BQF6	1050 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	MTIF3	Q9H2K0	278 aa	Known RBP	13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	HIPK3	Q9H422	1215 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	TCEAL9	Q9UHQ7	104 aa		13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	ZNF215	Q9UL58	517 aa	Predicted RBP	13.42	□□□□□ -0.26
PRKCSH-206	ENST00000587509	RANBP2	P49792	3224 aa	Known RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	TRIM43B	A6NCK2	446 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SMCO2	A6NFE2	343 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	MAFG	O15525	162 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PRPF3	O43395	683 aa	Known RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	XBP1	P17861	261 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PDIA3	P30101	505 aa	Known RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	ADD1	P35611	737 aa	Known RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PSMC6	P62333	389 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SSRP1	Q08945	709 aa	Known RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	UBE2S	Q16763	222 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	C7orf31	Q8N865	590 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SLC26A6	Q9BXS9	759 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	UPF2	Q9HAU5	1272 aa	Known RBP	13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PCDHA6	Q9UN73	950 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PCDHA8	Q9Y5H6	950 aa		13.41	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SPATA31C2	B4DYI2	1134 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	PPFIA4	O75335	1185 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	RGS20	O76081	388 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	F2	P00734	622 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	CD4	P01730	458 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	FXR1	P51114	621 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	CHMP4BP1	P59074	171 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	CCT2	P78371	535 aa	Known RBP	13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	TOB2	Q14106	344 aa	Predicted RBP	13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	LRIT3	Q3SXY7	679 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	TMEM63B	Q5T3F8	832 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	MYSM1	Q5VVJ2	828 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	MFSD5	Q6N075	450 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SH3RF1	Q7Z6J0	888 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	ANO3	Q9BYT9	981 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	C22orf23	Q9BZE7	217 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SLK	Q9H2G2	1235 aa	Predicted RBP	13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SH3GLB2	Q9NR46	395 aa		13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.4	□□□□□ -0.26
PRKCSH-206	ENST00000587509	SCN10A	Q9Y5Y9	1956 aa		13.4	□□□□□ -0.27
PRKCSH-206	ENST00000587509	B4GALT4	O60513	344 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	DEXI	O95424	95 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PFKM	P08237	780 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	HOXD8	P13378	290 aa	Predicted RBP	13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PTGS1	P23219	599 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	ZNF76	P36508	570 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	MRPS9	P82933	396 aa	Known RBP	13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	SET	Q01105	290 aa	Predicted RBP	13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	BFSP2	Q13515	415 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	NBPF20	Q3BBV1	942 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	GPR153	Q6NV75	609 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	SESTD1	Q86VW0	696 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	WASF1	Q92558	559 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PHKB	Q93100	1093 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	SDF4	Q9BRK5	362 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PPP1R12C	Q9BZL4	782 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	ZMYND12	Q9H0C1	365 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	RTEL1	Q9NZ71	1219 aa		13.39	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PITPNM1	O00562	1244 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	ZNF286B	P0CG31	522 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	GNAT1	P11488	350 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	SREBF1	P36956	1147 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PSEN2	P49810	448 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	MFSD10	Q14728	455 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	GALNT17	Q6IS24	598 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	RETREG2	Q8NC44	543 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	CAGE1	Q8TC20	777 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	TNPO1	Q92973	898 aa	Known RBP	13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	IL17RA	Q96F46	866 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	RNPC3	Q96LT9	517 aa	Known RBP	13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	NCOA5	Q9HCD5	579 aa	Known RBP	13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	JADE2	Q9NQC1	790 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	STK36	Q9NRP7	1315 aa		13.38	□□□□□ -0.27
PRKCSH-206	ENST00000587509	DNAH12	Q6ZR08	3092 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	SLC34A2	O95436	690 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PARN	O95453	639 aa	Known RBP	13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	RFC2	P35250	354 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	NLRP5	P59047	1200 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	STK3	Q13188	491 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	PTGIS	Q16647	500 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	KIAA0753	Q2KHM9	967 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	HSDL1	Q3SXM5	330 aa		13.37	□□□□□ -0.27
PRKCSH-206	ENST00000587509	CEP55	Q53EZ4	464 aa		13.37	□□□□□ -0.27

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