RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 CXXC1Q9P0U4 656 aaPredicted RBP18.56■□□□□ 0.56
CXXC1-209ENST00000587342 MYH7BA7E2Y1 1941 aa18.56■□□□□ 0.56
CXXC1-209ENST00000587342 SCN5AQ14524 2016 aa18.56■□□□□ 0.56
CXXC1-209ENST00000587342 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 HAS3O00219 553 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 ICAM3P32942 547 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 APOBRQ0VD83 1088 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 HIC1Q14526 733 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 DGKDQ16760 1214 aa18.55■□□□□ 0.56
CXXC1-209ENST00000587342 GDF6Q6KF10 455 aaPredicted RBP18.55■□□□□ 0.56
CXXC1-209ENST00000587342 CDH23Q9H251 3354 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 GRXCR1A8MXD5 290 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 SPATA31C2B4DYI2 1134 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 CASTP20810 708 aaKnown RBP18.54■□□□□ 0.56
CXXC1-209ENST00000587342 PSEN2P49810 448 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 PTPN11Q06124 597 aaPredicted RBP18.54■□□□□ 0.56
CXXC1-209ENST00000587342 PCNX4Q63HM2 1172 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 PSRC1Q6PGN9 363 aaPredicted RBP18.54■□□□□ 0.56
CXXC1-209ENST00000587342 Q6ZUG5 572 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 SESTD1Q86VW0 696 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 DHX38Q92620 1227 aaKnown RBP18.54■□□□□ 0.56
CXXC1-209ENST00000587342 SPATA33Q96N06 139 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 PSTPIP2Q9H939 334 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 RBM28Q9NW13 759 aaKnown RBP18.54■□□□□ 0.56
CXXC1-209ENST00000587342 NID2Q14112 1375 aa18.54■□□□□ 0.56
CXXC1-209ENST00000587342 CHD9Q3L8U1 2897 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
CXXC1-209ENST00000587342 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 TGFB3P10600 412 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 RPS6KB1P23443 525 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 MFSD10Q14728 455 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 SYNE3Q6ZMZ3 975 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 HERVK_113Q902F9 699 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 BRF1Q92994 677 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 CUL5Q93034 780 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 C16orf70Q9BSU1 422 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 HDAC6Q9UBN7 1215 aa18.53■□□□□ 0.56
CXXC1-209ENST00000587342 STXBP3O00186 592 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 REC8O95072 547 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 ADD1P35611 737 aaKnown RBP18.52■□□□□ 0.56
CXXC1-209ENST00000587342 PBX2P40425 430 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 RCAN1P53805 252 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 PTGISQ16647 500 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 KIAA0753Q2KHM9 967 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 ZNF697Q5TEC3 545 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 WNT8BQ93098 351 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 ALG1Q9BT22 464 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 AGXT2Q9BYV1 514 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 GTF2IRD1Q9UHL9 959 aa18.52■□□□□ 0.56
CXXC1-209ENST00000587342 V9GY48 417 aaPredicted RBP18.52■□□□□ 0.56
CXXC1-209ENST00000587342 ADAMTS3O15072 1205 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 FIBPO43427 364 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 STAM2O75886 525 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 ITGB5P18084 799 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
CXXC1-209ENST00000587342 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 CYFIP1Q7L576 1253 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 OTOP2Q7RTS6 562 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 PGBD1Q96JS3 809 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 SEMA6BQ9H3T3 888 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 STXBP5LQ9Y2K9 1186 aa18.51■□□□□ 0.55
CXXC1-209ENST00000587342 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 PPFIA4O75335 1185 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 LGALS2P05162 132 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 IQCF3P0C7M6 154 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 DNAJB2P25686 324 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.55
CXXC1-209ENST00000587342 NAPAP54920 295 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 GPNMBQ14956 572 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 XRRA1Q6P2D8 792 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 METTL7BQ6UX53 244 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 DEFB128Q7Z7B8 93 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 TRIM50Q86XT4 487 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 GPR20Q99678 358 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 PBX4Q9BYU1 374 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 NAP1L2Q9ULW6 460 aaPredicted RBP18.5■□□□□ 0.55
CXXC1-209ENST00000587342 PCDHA6Q9UN73 950 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 PCDHA8Q9Y5H6 950 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 GBF1Q92538 1859 aa18.5■□□□□ 0.55
CXXC1-209ENST00000587342 TET1Q8NFU7 2136 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-209ENST00000587342 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-209ENST00000587342 ATP9AO75110 1047 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 FGBP02675 491 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 KCNA2P16389 499 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 TRIM71Q2Q1W2 868 aaKnown RBP18.49■□□□□ 0.55
CXXC1-209ENST00000587342 PPP1R18Q6NYC8 613 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 C7orf31Q8N865 590 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 CDX2Q99626 313 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-209ENST00000587342 KATNAL1Q9BW62 490 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 RIC8AQ9NPQ8 531 aa18.49■□□□□ 0.55
CXXC1-209ENST00000587342 TMEM260Q9NX78 707 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms