RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HAND2P61296 217 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 FGD1P98174 961 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 TAP1Q03518 808 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 TRDNQ13061 729 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 NBR1Q14596 966 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 ALX1Q15699 326 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 TKFCQ3LXA3 575 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 TMEM67Q5HYA8 995 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
VMP1-204ENST00000587259 FBXL16Q8N461 479 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 MORC4Q8TE76 937 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 GDPD5Q8WTR4 605 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 FTOQ9C0B1 505 aaKnown RBP eCLIP9.06□□□□□ -0.96
VMP1-204ENST00000587259 RANBP17Q9H2T7 1088 aaKnown RBP9.06□□□□□ -0.96
VMP1-204ENST00000587259 MTUS1Q9ULD2 1270 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 SYNPO2Q9UMS6 1093 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 KIF3AQ9Y496 699 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 TRANK1O15050 2925 aa9.06□□□□□ -0.96
VMP1-204ENST00000587259 TET1Q8NFU7 2136 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 ZNF213O14771 459 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 SORBS3O60504 671 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 PPP1R37O75864 691 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
VMP1-204ENST00000587259 CYP21A2P08686 494 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 IQCF3P0C7M6 154 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 GOLGA8HP0CJ92 632 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 PCP11498 1178 aaKnown RBP9.05□□□□□ -0.96
VMP1-204ENST00000587259 PLA2G5P39877 138 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 DEFB103AP81534 67 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 GRB10Q13322 594 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 GPNMBQ14956 572 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 USH1GQ495M9 461 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 CLEC17AQ6ZS10 378 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 DHX32Q7L7V1 743 aaKnown RBP9.05□□□□□ -0.96
VMP1-204ENST00000587259 CHST3Q7LGC8 479 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 RALYLQ86SE5 291 aaKnown RBP9.05□□□□□ -0.96
VMP1-204ENST00000587259 SPNS2Q8IVW8 549 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 TBC1D5Q92609 795 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 CTAGE1Q96RT6 745 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 TMEM47Q9BQJ4 181 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 CNNM2Q9H8M5 875 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 CD320Q9NPF0 282 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 Q9Y3F1 56 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 ATP6V1DQ9Y5K8 247 aa9.05□□□□□ -0.96
VMP1-204ENST00000587259 LPXNO60711 386 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 PLA2G6O60733 806 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 FDX1P10109 184 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 RPS6P62753 249 aaKnown RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 PDE4DQ08499 809 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 PPP2R5BQ15173 497 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 LY6KQ17RY6 165 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 SKOR2Q2VWA4 1001 aaPredicted RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 ADCK5Q3MIX3 580 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 GDF6Q6KF10 455 aaPredicted RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 FAM117BQ6P1L5 589 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 RNF207Q6ZRF8 634 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 HERC6Q8IVU3 1022 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 NCOA7Q8NI08 942 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 DCAF4Q8WV16 495 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 DHX38Q92620 1227 aaKnown RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 FAM122AQ96E09 287 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 ZKSCAN3Q9BRR0 538 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 MTG1Q9BT17 334 aaPredicted RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 RNF41Q9H4P4 317 aaPredicted RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
VMP1-204ENST00000587259 POLR3EQ9NVU0 708 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 SMC3Q9UQE7 1217 aa9.04□□□□□ -0.96
VMP1-204ENST00000587259 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 RBM47A0AV96 593 aaKnown RBP9.03□□□□□ -0.96
VMP1-204ENST00000587259 E7EWF7 191 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 GTPBP6O43824 516 aaPredicted RBP9.03□□□□□ -0.96
VMP1-204ENST00000587259 TLL1O43897 1013 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 TXNP10599 105 aaKnown RBP9.03□□□□□ -0.96
VMP1-204ENST00000587259 PDHBP11177 359 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 MCM4P33991 863 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 MCM5P33992 734 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 NOVP48745 357 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 CPT1AP50416 773 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 ZNF200P98182 395 aaPredicted RBP9.03□□□□□ -0.96
VMP1-204ENST00000587259 PTGISQ16647 500 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 SEPT14Q6ZU15 432 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 WNT8BQ93098 351 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
VMP1-204ENST00000587259 LRFN3Q9BTN0 628 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 AGXT2Q9BYV1 514 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 C11orf16Q9NQ32 467 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 COL20A1Q9P218 1284 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 COL4A4P53420 1690 aaPredicted RBP9.03□□□□□ -0.96
VMP1-204ENST00000587259 SCN10AQ9Y5Y9 1956 aa9.03□□□□□ -0.96
VMP1-204ENST00000587259 C2orf72A6NCS6 295 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 A6NJR5 290 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 ORC4O43929 436 aa9.02□□□□□ -0.97
VMP1-204ENST00000587259 DHX16O60231 1041 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms