RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 HELLSQ9NRZ9 838 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 POTEB3A0JP26 581 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 H3BNC9 293 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 HOXD8P13378 290 aaPredicted RBP17.14■□□□□ 0.33
LRFN3-203ENST00000587257 EIF2AK2P19525 551 aaKnown RBP17.14■□□□□ 0.33
LRFN3-203ENST00000587257 GPM6BQ13491 265 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 TCEAL5Q5H9L2 206 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 POTEBQ6S5H4 581 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 SERINC5Q86VE9 423 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
LRFN3-203ENST00000587257 CPVLQ9H3G5 476 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 NSUN3Q9H649 340 aaKnown RBP17.14■□□□□ 0.33
LRFN3-203ENST00000587257 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
LRFN3-203ENST00000587257 NR3C2P08235 984 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 HAND2P61296 217 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 COL19A1Q14993 1142 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 PLEKHG4Q58EX7 1191 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 SEPT8Q92599 483 aa17.13■□□□□ 0.33
LRFN3-203ENST00000587257 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
LRFN3-203ENST00000587257 MRPL11Q9Y3B7 192 aaKnown RBP17.13■□□□□ 0.33
LRFN3-203ENST00000587257 RBAK-RBAKDNI3L0D1 243 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 PPFIA4O75335 1185 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 DGKHQ86XP1 1220 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 TMEM192Q8IY95 271 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 ESR2Q92731 530 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 PXMP2Q9NR77 195 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 CLDND1Q9NY35 253 aa17.12■□□□□ 0.33
LRFN3-203ENST00000587257 COL4A6Q14031 1691 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 A0A0D9SFI3 127 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 NCK2O43639 380 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
LRFN3-203ENST00000587257 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
LRFN3-203ENST00000587257 HIC1Q14526 733 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 KCNV1Q6PIU1 500 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 HFE2Q6ZVN8 426 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 TBC1D10CQ8IV04 446 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
LRFN3-203ENST00000587257 POP1Q99575 1024 aaKnown RBP17.11■□□□□ 0.33
LRFN3-203ENST00000587257 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
LRFN3-203ENST00000587257 TRIP12Q14669 1992 aaPredicted RBP17.1■□□□□ 0.33
LRFN3-203ENST00000587257 C17orf102A2RUQ5 167 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 CAND2O75155 1236 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 UPP2O95045 317 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 CFBP00751 764 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 QRICH1Q2TAL8 776 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 CELF3Q5SZQ8 465 aaKnown RBP17.1■□□□□ 0.33
LRFN3-203ENST00000587257 MYSM1Q5VVJ2 828 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 ATP6V0A1Q93050 837 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 TOP1MTQ969P6 601 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 MFSD14AQ96MC6 490 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 KAT14Q9H8E8 782 aa17.1■□□□□ 0.33
LRFN3-203ENST00000587257 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
LRFN3-203ENST00000587257 SORBS3O60504 671 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 GGPS1O95749 300 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 IRS1P35568 1242 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 NT5C2P49902 561 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 RPAINQ86UA6 219 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 NEDD4P46934 1319 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 SALL3Q9BXA9 1300 aa17.09■□□□□ 0.33
LRFN3-203ENST00000587257 CCDC171Q6TFL3 1326 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 CTSHP09668 335 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.32
LRFN3-203ENST00000587257 CTNNB1P35222 781 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 HSD17B4P51659 736 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 CCDC178Q5BJE1 867 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
LRFN3-203ENST00000587257 APBB2Q92870 758 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
LRFN3-203ENST00000587257 C11orf84Q9BUA3 381 aaPredicted RBP17.08■□□□□ 0.32
LRFN3-203ENST00000587257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
LRFN3-203ENST00000587257 H3BRB1 525 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 RGS20O76081 388 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 SMIM10L2AP0DMW4 78 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 SMIM10L2BP0DMW5 78 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 TGFB3P10600 412 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 UBA1P22314 1058 aaKnown RBP17.07■□□□□ 0.32
LRFN3-203ENST00000587257 HOXC8P31273 242 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 LTBRP36941 435 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 SMAD2Q15796 467 aaKnown RBP17.07■□□□□ 0.32
LRFN3-203ENST00000587257 TICAM2Q86XR7 235 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 FIBCD1Q8N539 461 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
LRFN3-203ENST00000587257 LMAN2LQ9H0V9 348 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms