RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 PPTC7Q8NI37 304 aa23.37■■□□□ 1.33
CLPTM1-204ENST00000585961 GPKOWQ92917 476 aaPredicted RBP eCLIP23.37■■□□□ 1.33
CLPTM1-204ENST00000585961 SPATA33Q96N06 139 aa23.37■■□□□ 1.33
CLPTM1-204ENST00000585961 PIGSQ96S52 555 aa23.37■■□□□ 1.33
CLPTM1-204ENST00000585961 BCAS3Q9H6U6 928 aa23.37■■□□□ 1.33
CLPTM1-204ENST00000585961 POU3F3P20264 500 aaPredicted RBP23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 HSDL1Q3SXM5 330 aa23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 CELF3Q5SZQ8 465 aaKnown RBP23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 MYSM1Q5VVJ2 828 aa23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 STOX1Q6ZVD7 989 aa23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 VSIG10LQ86VR7 867 aa23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 EMID1Q96A84 441 aaPredicted RBP23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 MTUS1Q9ULD2 1270 aa23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 PRRC2BQ5JSZ5 2229 aaKnown RBP23.36■■□□□ 1.33
CLPTM1-204ENST00000585961 TCF20Q9UGU0 1960 aaKnown RBP23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 HAS3O00219 553 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 IFIT3O14879 490 aaKnown RBP23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 GGPS1O95749 300 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 PDE4AP27815 886 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 PTH1RQ03431 593 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 TRDNQ13061 729 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 PTK7Q13308 1070 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 PGM5Q15124 567 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 CNKSR3Q6P9H4 555 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 KATNAL1Q9BW62 490 aa23.35■■□□□ 1.33
CLPTM1-204ENST00000585961 PPFIA4O75335 1185 aa23.34■■□□□ 1.33
CLPTM1-204ENST00000585961 TRIM71Q2Q1W2 868 aaKnown RBP23.34■■□□□ 1.33
CLPTM1-204ENST00000585961 MLXIPQ9HAP2 919 aa23.34■■□□□ 1.33
CLPTM1-204ENST00000585961 TAF6LQ9Y6J9 622 aa23.34■■□□□ 1.33
CLPTM1-204ENST00000585961 GCOM1H8Y6P7 765 aaPredicted RBP23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 F2P00734 622 aa23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 CXCL10P02778 98 aa23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 POLR2MP0CAP2 368 aa23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 IKBKEQ14164 716 aa23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 AAK1Q2M2I8 961 aa23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.33■■□□□ 1.33
CLPTM1-204ENST00000585961 ABHD14A-ACY1A0A1B0GW23 586 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 LPXNO60711 386 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 CYP21A2P08686 494 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 GSPT1P15170 499 aaKnown RBP23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 CCND2P30279 289 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 THPOP40225 353 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 MBTPS1Q14703 1052 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 GRM4Q14833 912 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 TRAF7Q6Q0C0 670 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 GDPD5Q8WTR4 605 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 RAD9AQ99638 391 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 RIOX1Q9H6W3 641 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 RTEL1Q9NZ71 1219 aa23.32■■□□□ 1.32
CLPTM1-204ENST00000585961 CYTH3O43739 400 aa23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 PARNO95453 639 aaKnown RBP23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 RBL2Q08999 1139 aa23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 KCNV1Q6PIU1 500 aa23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 C16orf70Q9BSU1 422 aa23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 MAP3K20Q9NYL2 800 aaKnown RBP23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 U3KPZ7 1027 aaPredicted RBP23.31■■□□□ 1.32
CLPTM1-204ENST00000585961 TRANK1O15050 2925 aa23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 ERICH2A1L162 156 aa23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 UBA1P22314 1058 aaKnown RBP23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 GHRHRQ02643 423 aa23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 TTC22Q5TAA0 569 aa23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 HLA-CQ95604 372 aa23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 SUGCTQ9HAC7 445 aa23.3■■□□□ 1.32
CLPTM1-204ENST00000585961 PNMA6FA0A0J9YX94 578 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 LGR5O75473 907 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 GJB5O95377 273 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 TGFB3P10600 412 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 CHMLP26374 656 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 WTAPQ15007 396 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 DBF4BQ8NFT6 615 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 ATP6V0A1Q93050 837 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 OSBPL7Q9BZF2 842 aa23.29■■□□□ 1.32
CLPTM1-204ENST00000585961 MYH7BA7E2Y1 1941 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 RSPH10B2B2RC85 870 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 E7EWF7 191 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 H3BRB1 525 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 TREHO43280 583 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 RSPH10BP0C881 870 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 HOXD8P13378 290 aaPredicted RBP23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 SAMD3Q8N6K7 520 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 TUT1Q9H6E5 874 aaKnown RBP23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 COG5Q9UP83 839 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 TELO2Q9Y4R8 837 aa23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 SUPT16HQ9Y5B9 1047 aaKnown RBP23.28■■□□□ 1.32
CLPTM1-204ENST00000585961 BAZ2BQ9UIF8 2168 aaKnown RBP23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 C17orf102A2RUQ5 167 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 LINC01553A4QN01 128 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 SMIM10L2AP0DMW4 78 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 SMIM10L2BP0DMW5 78 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 MRPS9P82933 396 aaKnown RBP23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 CYFIP1Q7L576 1253 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 RALYLQ86SE5 291 aaKnown RBP23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 RUFY2Q8WXA3 655 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 TGS1Q96RS0 853 aaKnown RBP23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 RNPEPQ9H4A4 650 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 KIAA1217Q5T5P2 1943 aa23.27■■□□□ 1.32
CLPTM1-204ENST00000585961 ERVK-21P61565 698 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 TROAPQ12815 778 aa23.26■■□□□ 1.31
CLPTM1-204ENST00000585961 UTP14CQ5TAP6 766 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms