RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
LIG3-205ENST00000585941 KCNJ18B7U540 433 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 TAL1P17542 331 aaPredicted RBP15.83■□□□□ 0.13
LIG3-205ENST00000585941 MUTP22033 750 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 STK4Q13043 487 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 KCNJ12Q14500 433 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 NCAPH2Q6IBW4 605 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 TTI2Q6NXR4 508 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 NIPA1Q7RTP0 329 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 KCNK18Q7Z418 384 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.13
LIG3-205ENST00000585941 TBC1D5Q92609 795 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 SLC5A5Q92911 643 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 AGBL1Q96MI9 1066 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 WDR11Q9BZH6 1224 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 MAF1Q9H063 256 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 MAGEC2Q9UBF1 373 aaPredicted RBP15.83■□□□□ 0.13
LIG3-205ENST00000585941 VAV3Q9UKW4 847 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 DNM3Q9UQ16 869 aa15.83■□□□□ 0.13
LIG3-205ENST00000585941 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 POLR2AP24928 1970 aaKnown RBP15.83■□□□□ 0.12
LIG3-205ENST00000585941 FGFR1OPO95684 399 aaKnown RBP15.83■□□□□ 0.12
LIG3-205ENST00000585941 PLA2G4BP0C869 781 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 BCRP11274 1271 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 EHHADHQ08426 723 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 KRT31Q15323 416 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 ECM1Q16610 540 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 CCDC65Q8IXS2 484 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 CLEC4DQ8WXI8 215 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 GJA10Q969M2 543 aa15.83■□□□□ 0.12
LIG3-205ENST00000585941 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 POTECB2RU33 542 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 MEIS1O00470 390 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 N4BP3O15049 544 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 CCP110O43303 1012 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 MED24O75448 989 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 KIF20AO95235 890 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 TPM2P07951 284 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 IDEP14735 1019 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 HIRAP54198 1017 aaPredicted RBP15.82■□□□□ 0.12
LIG3-205ENST00000585941 OAZ1P54368 228 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 PPP2R5CQ13362 524 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 LRCH2Q5VUJ6 765 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 POTEBQ6S5H4 581 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 DYMQ7RTS9 669 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 CATSPER3Q86XQ3 398 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 C17orf53Q8N3J3 647 aaPredicted RBP15.82■□□□□ 0.12
LIG3-205ENST00000585941 CSGALNACT2Q8N6G5 542 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 ZKSCAN4Q969J2 545 aaPredicted RBP15.82■□□□□ 0.12
LIG3-205ENST00000585941 DNAJC19Q96DA6 116 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 TUFT1Q9NNX1 390 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 LOXHD1Q8IVV2 1947 aa15.82■□□□□ 0.12
LIG3-205ENST00000585941 PSMD10O75832 226 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 TPM1P09493 284 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 ALAS1P13196 640 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 PBX1P40424 430 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 STAT3P40763 770 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 COPB1P53618 953 aaKnown RBP15.81■□□□□ 0.12
LIG3-205ENST00000585941 LRRC63Q05C16 580 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 TRIM14Q14142 442 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 PPFIBP1Q86W92 1011 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 CPXCR1Q8N123 301 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 KIAA0895Q8NCT3 520 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 RBM46Q8TBY0 533 aaKnown RBP15.81■□□□□ 0.12
LIG3-205ENST00000585941 RIT2Q99578 217 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 SRRTQ9BXP5 876 aaKnown RBP15.81■□□□□ 0.12
LIG3-205ENST00000585941 TMX1Q9H3N1 280 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 PANK4Q9NVE7 773 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 TMOD4Q9NZQ9 345 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.12
LIG3-205ENST00000585941 ZHX2Q9Y6X8 837 aa15.81■□□□□ 0.12
LIG3-205ENST00000585941 VWA5AO00534 786 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 GAS7O60861 476 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIG3-205ENST00000585941 SPATA31C1P0DKV0 1188 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 FCER1AP12319 257 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 SLC12A3P55017 1021 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 OTOP1Q7RTM1 612 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 GPBP1Q86WP2 473 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 SYT2Q8N9I0 419 aaPredicted RBP15.8■□□□□ 0.12
LIG3-205ENST00000585941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIG3-205ENST00000585941 CYP2W1Q8TAV3 490 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 DCPSQ96C86 337 aaKnown RBP15.8■□□□□ 0.12
LIG3-205ENST00000585941 MXRA8Q9BRK3 442 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 RAVER2Q9HCJ3 691 aaKnown RBP15.8■□□□□ 0.12
LIG3-205ENST00000585941 RNF181Q9P0P0 153 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 FRMPD4Q14CM0 1322 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 MYPNQ86TC9 1320 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 RLFQ13129 1914 aa15.8■□□□□ 0.12
LIG3-205ENST00000585941 TRIM49BA6NDI0 452 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 E9PMD0 336 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 NFIBO00712 420 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 CYP11B2P19099 503 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 COASYQ13057 564 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 FAM26FQ5R3K3 315 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 IRF2BP1Q8IU81 584 aa15.79■□□□□ 0.12
LIG3-205ENST00000585941 NEK9Q8TD19 979 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms