RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 MICU3Q86XE3 530 aa21.52■■□□□ 1.04
ATG4D-203ENST00000585752 CCDC82Q8N4S0 544 aa21.52■■□□□ 1.04
ATG4D-203ENST00000585752 PPTC7Q8NI37 304 aa21.52■■□□□ 1.04
ATG4D-203ENST00000585752 HERVK_113Q902F9 699 aa21.52■■□□□ 1.04
ATG4D-203ENST00000585752 EMID1Q96A84 441 aaPredicted RBP21.52■■□□□ 1.04
ATG4D-203ENST00000585752 TIFAQ96CG3 184 aa21.52■■□□□ 1.04
ATG4D-203ENST00000585752 SPATA33Q96N06 139 aa21.52■■□□□ 1.04
ATG4D-203ENST00000585752 CDX2Q99626 313 aaPredicted RBP21.52■■□□□ 1.04
ATG4D-203ENST00000585752 SCN5AQ14524 2016 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 LAMA3Q16787 3333 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 KLF18A0A0U1RQI7 1052 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 NOP56O00567 594 aaKnown RBP21.51■■□□□ 1.03
ATG4D-203ENST00000585752 GGPS1O95749 300 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 RFC2P35250 354 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 COL9A3Q14050 684 aaPredicted RBP21.51■■□□□ 1.03
ATG4D-203ENST00000585752 RAB11FIP4Q86YS3 637 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 FANCBQ8NB91 859 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 PPP1R13LQ8WUF5 828 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 FTOQ9C0B1 505 aaKnown RBP eCLIP21.51■■□□□ 1.03
ATG4D-203ENST00000585752 WNT8AQ9H1J5 351 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 ZSWIM6Q9HCJ5 1215 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 SLC4A7Q9Y6M7 1214 aa21.51■■□□□ 1.03
ATG4D-203ENST00000585752 GBF1Q92538 1859 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 ZBTB43O43298 467 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 PPFIA4O75335 1185 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 PLEKHA8P1O95397 391 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 PSEN2P49810 448 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 RAB30Q15771 203 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 CELF3Q5SZQ8 465 aaKnown RBP21.5■■□□□ 1.03
ATG4D-203ENST00000585752 NLRX1Q86UT6 975 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 CMTR1Q8N1G2 835 aaKnown RBP21.5■■□□□ 1.03
ATG4D-203ENST00000585752 SRBD1Q8N5C6 995 aaKnown RBP21.5■■□□□ 1.03
ATG4D-203ENST00000585752 BRF1Q92994 677 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 ZFP91Q96JP5 570 aaPredicted RBP21.5■■□□□ 1.03
ATG4D-203ENST00000585752 UPF3BQ9BZI7 483 aaKnown RBP21.5■■□□□ 1.03
ATG4D-203ENST00000585752 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
ATG4D-203ENST00000585752 RBM28Q9NW13 759 aaKnown RBP21.5■■□□□ 1.03
ATG4D-203ENST00000585752 PITPNM1O00562 1244 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 FOSL2P15408 326 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 NEDD9Q14511 834 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 MFSD10Q14728 455 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 MYSM1Q5VVJ2 828 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 APOA5Q6Q788 366 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 IL31RAQ8NI17 732 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 CAGE1Q8TC20 777 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 PSTPIP2Q9H939 334 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 EHMT1Q9H9B1 1298 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 RTEL1Q9NZ71 1219 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 KAT6AQ92794 2004 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 DOCK5Q9H7D0 1870 aa21.49■■□□□ 1.03
ATG4D-203ENST00000585752 TANC1Q9C0D5 1861 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 GOLGA8AA7E2F4 631 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 GOLGA8BA8MQT2 603 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 APOBRQ0VD83 1088 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 KIAA0753Q2KHM9 967 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 XRRA1Q6P2D8 792 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 USP17L6PQ6QN14 398 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 SESTD1Q86VW0 696 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 MYLIPQ8WY64 445 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 TTYH1Q9H313 450 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-203ENST00000585752 ZNF576Q9H609 170 aa21.48■■□□□ 1.03
ATG4D-203ENST00000585752 SPDYE3A6NKU9 549 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 GRXCR1A8MXD5 290 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 PIK3CDO00329 1044 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 FIBPO43427 364 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 IQCF3P0C7M6 154 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 ZNF286BP0CG31 522 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 UBA1P22314 1058 aaKnown RBP21.47■■□□□ 1.03
ATG4D-203ENST00000585752 RTN1Q16799 776 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 RASIP1Q5U651 963 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 HEATR3Q7Z4Q2 680 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 PBX4Q9BYU1 374 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 C22orf23Q9BZE7 217 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 HDAC6Q9UBN7 1215 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 GTF2IRD1Q9UHL9 959 aa21.47■■□□□ 1.03
ATG4D-203ENST00000585752 LAMA2P24043 3122 aaKnown RBP21.47■■□□□ 1.03
ATG4D-203ENST00000585752 CCDC196A0A1B0GTZ2 297 aa21.46■■□□□ 1.03
ATG4D-203ENST00000585752 RGS20O76081 388 aa21.46■■□□□ 1.03
ATG4D-203ENST00000585752 METAP2P50579 478 aaKnown RBP eCLIP21.46■■□□□ 1.03
ATG4D-203ENST00000585752 GDF6Q6KF10 455 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-203ENST00000585752 TMTC3Q6ZXV5 915 aa21.46■■□□□ 1.03
ATG4D-203ENST00000585752 AFAP1L1Q8TED9 768 aa21.46■■□□□ 1.03
ATG4D-203ENST00000585752 KAT2BQ92831 832 aa21.46■■□□□ 1.03
ATG4D-203ENST00000585752 GAS2L1Q99501 681 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-203ENST00000585752 SLC28A3Q9HAS3 691 aa21.46■■□□□ 1.03
ATG4D-203ENST00000585752 CXXC1Q9P0U4 656 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-203ENST00000585752 PARNO95453 639 aaKnown RBP21.45■■□□□ 1.02
ATG4D-203ENST00000585752 RCAN1P53805 252 aa21.45■■□□□ 1.02
ATG4D-203ENST00000585752 ANKRD1Q15327 319 aa21.45■■□□□ 1.02
ATG4D-203ENST00000585752 HSDL1Q3SXM5 330 aa21.45■■□□□ 1.02
ATG4D-203ENST00000585752 PCNX4Q63HM2 1172 aa21.45■■□□□ 1.02
ATG4D-203ENST00000585752 FBXL16Q8N461 479 aa21.45■■□□□ 1.02
ATG4D-203ENST00000585752 GIMAP8Q8ND71 665 aaPredicted RBP21.45■■□□□ 1.02
ATG4D-203ENST00000585752 BRPF3Q9ULD4 1205 aa21.45■■□□□ 1.02
ATG4D-203ENST00000585752 hCG_1642624A0A1W2PR95 340 aa21.44■■□□□ 1.02
ATG4D-203ENST00000585752 MEIS2O14770 477 aa21.44■■□□□ 1.02
ATG4D-203ENST00000585752 F2P00734 622 aa21.44■■□□□ 1.02
ATG4D-203ENST00000585752 ATP2A2P16615 1042 aaKnown RBP21.44■■□□□ 1.02
ATG4D-203ENST00000585752 ICAM3P32942 547 aa21.44■■□□□ 1.02
ATG4D-203ENST00000585752 PBX2P40425 430 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms