RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 CPXCR1Q8N123 301 aa23.26■■□□□ 1.31
GHDC-205ENST00000585735 HOXC10Q9NYD6 342 aa23.26■■□□□ 1.31
GHDC-205ENST00000585735 ADAMTS5Q9UNA0 930 aa23.26■■□□□ 1.31
GHDC-205ENST00000585735 AGTPBP1Q9UPW5 1226 aa23.26■■□□□ 1.31
GHDC-205ENST00000585735 LOC285556D6RIA3 1793 aa23.25■■□□□ 1.31
GHDC-205ENST00000585735 CFBP00751 764 aa23.25■■□□□ 1.31
GHDC-205ENST00000585735 HOXA13P31271 388 aaPredicted RBP23.25■■□□□ 1.31
GHDC-205ENST00000585735 OAZ1P54368 228 aa23.25■■□□□ 1.31
GHDC-205ENST00000585735 MDM2Q00987 491 aaPredicted RBP23.25■■□□□ 1.31
GHDC-205ENST00000585735 MCF2L2Q86YR7 1114 aa23.25■■□□□ 1.31
GHDC-205ENST00000585735 PROCA1Q8NCQ7 364 aaPredicted RBP23.25■■□□□ 1.31
GHDC-205ENST00000585735 P2RX7Q99572 595 aaKnown RBP23.25■■□□□ 1.31
GHDC-205ENST00000585735 TDP2O95551 362 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 COL6A1P12109 1028 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 ALAS1P13196 640 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 SREBF1P36956 1147 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 TREML2Q5T2D2 321 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 REPS2Q8NFH8 660 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 TBC1D5Q92609 795 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 SDF4Q9BRK5 362 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 TSPY26PQ9H489 355 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 PARP14Q460N5 1801 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 FRMPD3Q5JV73 1810 aa23.24■■□□□ 1.31
GHDC-205ENST00000585735 CYP3A7-CYP3A51PA0A087WV96 503 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 CYP3A7P24462 503 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 ARHGAP4P98171 946 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 MOXD1Q6UVY6 613 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 SAMD3Q8N6K7 520 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 CRYGNQ8WXF5 182 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 CLEC4DQ8WXI8 215 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 SYMPKQ92797 1274 aaKnown RBP23.23■■□□□ 1.31
GHDC-205ENST00000585735 EHMT1Q9H9B1 1298 aa23.23■■□□□ 1.31
GHDC-205ENST00000585735 DDX25Q9UHL0 483 aaKnown RBP23.23■■□□□ 1.31
GHDC-205ENST00000585735 RLFQ13129 1914 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 SMCHD1A6NHR9 2005 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 HSD17B4P51659 736 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 GHRHRQ02643 423 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 CALCRLQ16602 461 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 MAP3K21Q5TCX8 1036 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 USP49Q70CQ1 688 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 FCHSD1Q86WN1 690 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 CKAP2LQ8IYA6 745 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 TRIB2Q92519 343 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 MBOAT7Q96N66 472 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 MTMR9Q96QG7 549 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 DNAH12Q6ZR08 3092 aa23.22■■□□□ 1.31
GHDC-205ENST00000585735 SPDYE16A6NNV3 312 aaPredicted RBP23.21■■□□□ 1.31
GHDC-205ENST00000585735 SLC37A4O43826 429 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 CYP3A4P08684 503 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 HOXA7P31268 230 aaPredicted RBP23.21■■□□□ 1.31
GHDC-205ENST00000585735 LRRC26Q2I0M4 334 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 KRBA2Q6ZNG9 492 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 EPSTI1Q96J88 318 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 MAP3K20Q9NYL2 800 aaKnown RBP23.21■■□□□ 1.31
GHDC-205ENST00000585735 PNMA3Q9UL41 463 aa23.21■■□□□ 1.31
GHDC-205ENST00000585735 MYH7BA7E2Y1 1941 aa23.2■■□□□ 1.3
GHDC-205ENST00000585735 ATP2A1O14983 1001 aa23.2■■□□□ 1.3
GHDC-205ENST00000585735 CCDC192P0DO97 292 aa23.2■■□□□ 1.3
GHDC-205ENST00000585735 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
GHDC-205ENST00000585735 L1TD1Q5T7N2 865 aaKnown RBP23.2■■□□□ 1.3
GHDC-205ENST00000585735 ELOA2Q8IYF1 753 aaPredicted RBP23.2■■□□□ 1.3
GHDC-205ENST00000585735 TRERF1Q96PN7 1200 aa23.2■■□□□ 1.3
GHDC-205ENST00000585735 PYM1Q9BRP8 204 aaKnown RBP23.2■■□□□ 1.3
GHDC-205ENST00000585735 NFIBO00712 420 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 POLR2DO15514 142 aaKnown RBP23.19■■□□□ 1.3
GHDC-205ENST00000585735 CIITAP33076 1130 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 TXLNAP40222 546 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 GCLCP48506 637 aaPredicted RBP23.19■■□□□ 1.3
GHDC-205ENST00000585735 LONRF3Q496Y0 759 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 MUM1L1Q5H9M0 696 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 SASS6Q6UVJ0 657 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 CNNM3Q8NE01 707 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 AK8Q96MA6 479 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 CDX2Q99626 313 aaPredicted RBP23.19■■□□□ 1.3
GHDC-205ENST00000585735 RNF146Q9NTX7 359 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 USP25Q9UHP3 1055 aa23.19■■□□□ 1.3
GHDC-205ENST00000585735 LTBP2Q14767 1821 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 TMEM132BQ14DG7 1078 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 TMEM266Q2M3C6 531 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 Q4G0T1 1027 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 ZNF697Q5TEC3 545 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 SNRNP48Q6IEG0 339 aaKnown RBP23.18■■□□□ 1.3
GHDC-205ENST00000585735 TEX13BQ9BXU2 312 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 PANK2Q9BZ23 570 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 HOMER2Q9NSB8 354 aa23.18■■□□□ 1.3
GHDC-205ENST00000585735 ZNF214Q9UL59 606 aaPredicted RBP23.18■■□□□ 1.3
GHDC-205ENST00000585735 MARCH6O60337 910 aa23.17■■□□□ 1.3
GHDC-205ENST00000585735 PRKAR2AP13861 404 aaKnown RBP23.17■■□□□ 1.3
GHDC-205ENST00000585735 TXKP42681 527 aa23.17■■□□□ 1.3
GHDC-205ENST00000585735 MRE11P49959 708 aa23.17■■□□□ 1.3
GHDC-205ENST00000585735 FXR2P51116 673 aaKnown RBP eCLIP23.17■■□□□ 1.3
GHDC-205ENST00000585735 IRX3P78415 501 aaPredicted RBP23.17■■□□□ 1.3
GHDC-205ENST00000585735 PABPC4Q13310 644 aaKnown RBP eCLIP23.17■■□□□ 1.3
GHDC-205ENST00000585735 KANK3Q6NY19 840 aa23.17■■□□□ 1.3
GHDC-205ENST00000585735 PDILTQ8N807 584 aa23.17■■□□□ 1.3
GHDC-205ENST00000585735 MB21D1Q8N884 522 aa23.17■■□□□ 1.3
GHDC-205ENST00000585735 MAFAQ8NHW3 353 aaPredicted RBP23.17■■□□□ 1.3
GHDC-205ENST00000585735 CCSER1Q9C0I3 900 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms