RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 MYCLP12524 364 aaPredicted RBP26.48■■□□□ 1.83
LSM7-202ENST00000585395 XBP1P17861 261 aa26.48■■□□□ 1.83
LSM7-202ENST00000585395 TLE2Q04725 743 aa26.48■■□□□ 1.83
LSM7-202ENST00000585395 GPKOWQ92917 476 aaPredicted RBP eCLIP26.48■■□□□ 1.83
LSM7-202ENST00000585395 ELP1O95163 1332 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 A0A0U1RQG5 324 aaPredicted RBP26.47■■□□□ 1.83
LSM7-202ENST00000585395 DCDC2CA8MYV0 355 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 OPLAHO14841 1288 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 PTGS1P23219 599 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 CPT1AP50416 773 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 CCSAPQ6IQ19 270 aaPredicted RBP26.47■■□□□ 1.83
LSM7-202ENST00000585395 EHMT1Q9H9B1 1298 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 SH3GLB2Q9NR46 395 aa26.47■■□□□ 1.83
LSM7-202ENST00000585395 MROH7Q68CQ1 1323 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 KIAA1217Q5T5P2 1943 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 RBM47A0AV96 593 aaKnown RBP26.46■■□□□ 1.83
LSM7-202ENST00000585395 STXBP3O00186 592 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 PIK3CDO00329 1044 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 CABYRO75952 493 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 NR3C2P08235 984 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 GNA11P29992 359 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 ADCY7P51828 1080 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 TMEM63BQ5T3F8 832 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 MCTP2Q6DN12 878 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 CXCL17Q6UXB2 119 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 NECAB1Q8N987 351 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 C6orf50Q9HD87 102 aa26.46■■□□□ 1.83
LSM7-202ENST00000585395 ESYT2A0FGR8 921 aa26.45■■□□□ 1.82
LSM7-202ENST00000585395 MYL3P08590 195 aa26.45■■□□□ 1.82
LSM7-202ENST00000585395 CLTBP09497 229 aa26.45■■□□□ 1.82
LSM7-202ENST00000585395 GRIN2CQ14957 1233 aa26.45■■□□□ 1.82
LSM7-202ENST00000585395 BICD2Q8TD16 824 aa26.45■■□□□ 1.82
LSM7-202ENST00000585395 LLPHQ9BRT6 129 aaKnown RBP26.45■■□□□ 1.82
LSM7-202ENST00000585395 POLR3EQ9NVU0 708 aa26.45■■□□□ 1.82
LSM7-202ENST00000585395 SMCO2A6NFE2 343 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 LARGE1O95461 756 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 CCND2P30279 289 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 NKX3-2P78367 333 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 PKN1Q16512 942 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 USP38Q8NB14 1042 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 RIC8AQ9NPQ8 531 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 MRVI1Q9Y6F6 885 aa26.44■■□□□ 1.82
LSM7-202ENST00000585395 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.43■■□□□ 1.82
LSM7-202ENST00000585395 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.43■■□□□ 1.82
LSM7-202ENST00000585395 SPDYE3A6NKU9 549 aa26.43■■□□□ 1.82
LSM7-202ENST00000585395 KIAA0355O15063 1070 aa26.43■■□□□ 1.82
LSM7-202ENST00000585395 CTAGE5O15320 804 aa26.43■■□□□ 1.82
LSM7-202ENST00000585395 TLR3O15455 904 aaKnown RBP26.43■■□□□ 1.82
LSM7-202ENST00000585395 EIF3JO75822 258 aaKnown RBP26.43■■□□□ 1.82
LSM7-202ENST00000585395 DNAJB2P25686 324 aa26.43■■□□□ 1.82
LSM7-202ENST00000585395 PDCD2LQ9BRP1 358 aa26.43■■□□□ 1.82
LSM7-202ENST00000585395 TMEM39AQ9NV64 488 aa26.43■■□□□ 1.82
LSM7-202ENST00000585395 ORC3Q9UBD5 711 aaPredicted RBP26.43■■□□□ 1.82
LSM7-202ENST00000585395 FOSP01100 380 aaPredicted RBP26.42■■□□□ 1.82
LSM7-202ENST00000585395 GH1P01241 217 aa26.42■■□□□ 1.82
LSM7-202ENST00000585395 ITGB8P26012 769 aa26.42■■□□□ 1.82
LSM7-202ENST00000585395 EPHB4P54760 987 aa26.42■■□□□ 1.82
LSM7-202ENST00000585395 HMGN5P82970 282 aaKnown RBP26.42■■□□□ 1.82
LSM7-202ENST00000585395 PGM5Q15124 567 aa26.42■■□□□ 1.82
LSM7-202ENST00000585395 CCDC83Q8IWF9 413 aa26.42■■□□□ 1.82
LSM7-202ENST00000585395 COPS5Q92905 334 aa26.42■■□□□ 1.82
LSM7-202ENST00000585395 ARVCFO00192 962 aa26.41■■□□□ 1.82
LSM7-202ENST00000585395 RAG1P15918 1043 aa26.41■■□□□ 1.82
LSM7-202ENST00000585395 FPGSQ05932 587 aa26.41■■□□□ 1.82
LSM7-202ENST00000585395 ZMYND12Q9H0C1 365 aa26.41■■□□□ 1.82
LSM7-202ENST00000585395 KIF3AQ9Y496 699 aa26.41■■□□□ 1.82
LSM7-202ENST00000585395 PPFIA3O75145 1194 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 NLRP5P59047 1200 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 AP3B2Q13367 1082 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 LY6KQ17RY6 165 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 GALNT17Q6IS24 598 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 USP17L6PQ6QN14 398 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 NSUN7Q8NE18 718 aaKnown RBP26.4■■□□□ 1.82
LSM7-202ENST00000585395 ATXN2LQ8WWM7 1075 aaKnown RBP26.4■■□□□ 1.82
LSM7-202ENST00000585395 TOX2Q96NM4 488 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 ZNF576Q9H609 170 aa26.4■■□□□ 1.82
LSM7-202ENST00000585395 BDP1A6H8Y1 2624 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 MEIS2O14770 477 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 ARIH2O95376 493 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 ITGA7Q13683 1181 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 TRIM29Q14134 588 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 XRRA1Q6P2D8 792 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 ANKRD33Q7Z3H0 272 aa26.39■■□□□ 1.82
LSM7-202ENST00000585395 STAM2O75886 525 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 CTDNEP1O95476 244 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 CHMP4BP1P59074 171 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 PSMC6P62333 389 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 GNPTABQ3T906 1256 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 TYW1BQ6NUM6 668 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 KCNV1Q6PIU1 500 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 IL31RAQ8NI17 732 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 TMX3Q96JJ7 454 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 MTG1Q9BT17 334 aaPredicted RBP26.38■■□□□ 1.81
LSM7-202ENST00000585395 VPS54Q9P1Q0 977 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 NCOR1O75376 2440 aa26.38■■□□□ 1.81
LSM7-202ENST00000585395 KPNA6O60684 536 aa26.37■■□□□ 1.81
LSM7-202ENST00000585395 VSIG10LQ86VR7 867 aa26.37■■□□□ 1.81
LSM7-202ENST00000585395 REXO1Q8N1G1 1221 aaKnown RBP26.37■■□□□ 1.81
LSM7-202ENST00000585395 FAM184AQ8NB25 1140 aa26.37■■□□□ 1.81
LSM7-202ENST00000585395 TIFAQ96CG3 184 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms