RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 ZPBP2Q6X784 338 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 VPS37DQ86XT2 251 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 ABHD4Q8TB40 342 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 MYLIPQ8WY64 445 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 SYTL4Q96C24 671 aaPredicted RBP6.84□□□□□ -1.31
CRLF3-206ENST00000585268 NBPF4Q96M43 638 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 HAUS7Q99871 368 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 DSCC1Q9BVC3 393 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 MRVI1Q9Y6F6 885 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 KIF20BQ96Q89 1820 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 PEAK1Q9H792 1746 aa6.84□□□□□ -1.31
CRLF3-206ENST00000585268 DISP2A7MBM2 1401 aa6.84□□□□□ -1.32
CRLF3-206ENST00000585268 KIF24Q5T7B8 1368 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 SSU72P8A0A1W2PR75 194 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 FITM1A5D6W6 292 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 H0Y8X5 98 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 GSNP06396 782 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 SLC7A5Q01650 507 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
CRLF3-206ENST00000585268 NR0B2Q15466 257 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 DDB1Q16531 1140 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 OXR1Q8N573 874 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 ANKS4BQ8N8V4 417 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 BRF1Q92994 677 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
CRLF3-206ENST00000585268 MAP6Q96JE9 813 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.83□□□□□ -1.32
CRLF3-206ENST00000585268 KLHL25Q9H0H3 589 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 FHOD1Q9Y613 1164 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 THSD7AQ9UPZ6 1657 aa6.83□□□□□ -1.32
CRLF3-206ENST00000585268 NPC1L1Q9UHC9 1359 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 LTN1O94822 1766 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 RGPD5Q99666 1765 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 EXOC5O00471 708 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
CRLF3-206ENST00000585268 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
CRLF3-206ENST00000585268 ITGA4P13612 1032 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 IL2RBP14784 551 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 VAV1P15498 845 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 MTHFSP49914 203 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 CHRNEQ04844 493 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 TMEM67Q5HYA8 995 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 NOL9Q5SY16 702 aaKnown RBP6.82□□□□□ -1.32
CRLF3-206ENST00000585268 MCF2L2Q86YR7 1114 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 LILRA2Q8N149 483 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 MARCH10Q8NA82 808 aaPredicted RBP6.82□□□□□ -1.32
CRLF3-206ENST00000585268 FCRL2Q96LA5 508 aaPredicted RBP6.82□□□□□ -1.32
CRLF3-206ENST00000585268 RNF32Q9H0A6 362 aa6.82□□□□□ -1.32
CRLF3-206ENST00000585268 NOTOA8MTQ0 251 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 SMAD7O15105 426 aaKnown RBP6.81□□□□□ -1.32
CRLF3-206ENST00000585268 EFEMP2O95967 443 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 EPHX1P07099 455 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 ARID5AQ03989 594 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 RTP2Q5QGT7 225 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 VHLLQ6RSH7 139 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 FIBCD1Q8N539 461 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 SLC43A3Q8NBI5 491 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 HHIPL1Q96JK4 782 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 NOL6Q9H6R4 1146 aaKnown RBP6.81□□□□□ -1.32
CRLF3-206ENST00000585268 ERVK13-1Q9NX77 482 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 WHRNQ9P202 907 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 SUSD2Q9UGT4 822 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 ZMYM5Q9UJ78 669 aa6.81□□□□□ -1.32
CRLF3-206ENST00000585268 SMG6Q86US8 1419 aaKnown RBP6.81□□□□□ -1.32
CRLF3-206ENST00000585268 BRWD3Q6RI45 1802 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 ENDOUP21128 410 aaKnown RBP6.8□□□□□ -1.32
CRLF3-206ENST00000585268 DNAJA1P31689 397 aaKnown RBP6.8□□□□□ -1.32
CRLF3-206ENST00000585268 IL13P35225 146 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 ETFBP38117 255 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 KIR2DL1P43626 348 aaPredicted RBP6.8□□□□□ -1.32
CRLF3-206ENST00000585268 KIR2DL2P43627 348 aaPredicted RBP6.8□□□□□ -1.32
CRLF3-206ENST00000585268 TCEAL1Q15170 157 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 HEATR6Q6AI08 1181 aaKnown RBP6.8□□□□□ -1.32
CRLF3-206ENST00000585268 KIAA1211LQ6NV74 962 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 PTF1AQ7RTS3 328 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 SPPL2CQ8IUH8 684 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 POU5F2Q8N7G0 328 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 GMLQ99445 158 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 CDADC1Q9BWV3 514 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 SLC12A9Q9BXP2 914 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 ZNF408Q9H9D4 720 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 FAM53CQ9NYF3 392 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 MEGF6O75095 1541 aa6.8□□□□□ -1.32
CRLF3-206ENST00000585268 ANKRD26Q9UPS8 1709 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 TNS2Q63HR2 1409 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 A0A087WZG4 1122 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 LRRC10BA6NIK2 292 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 PSPNO60542 156 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 YBX3P16989 372 aaKnown RBP eCLIP6.79□□□□□ -1.32
CRLF3-206ENST00000585268 PPP2R1AP30153 589 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 TNNI3KQ59H18 835 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 CWF19L1Q69YN2 538 aaKnown RBP6.79□□□□□ -1.32
CRLF3-206ENST00000585268 MPZL3Q6UWV2 235 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 DEFB132Q7Z7B7 95 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 ADCY4Q8NFM4 1077 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 ZCRB1Q8TBF4 217 aaKnown RBP6.79□□□□□ -1.32
CRLF3-206ENST00000585268 RAPGEF4Q8WZA2 1011 aa6.79□□□□□ -1.32
CRLF3-206ENST00000585268 SHISA4Q96DD7 197 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms