RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ELF2Q15723 593 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TC2NQ8N9U0 490 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 HOXC10Q9NYD6 342 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 ITGBL1O95965 494 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 MCTP2Q6DN12 878 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 FBXO38Q6PIJ6 1188 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 REPS2Q8NFH8 660 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 CCDC51Q96ER9 411 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
CDK5RAP3-236ENST00000584991 TRPM7Q96QT4 1865 aa16.77■□□□□ 0.28
CDK5RAP3-236ENST00000584991 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 FOSP01100 380 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 POLR2MP0CAP2 368 aa16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TUBB2AQ13885 445 aa16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 FILIP1LQ4L180 1135 aa16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 UBXN4Q92575 508 aa16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TUBB2BQ9BVA1 445 aa16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TDP2O95551 362 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 DPYDQ12882 1025 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CST9Q5W186 159 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CLEC4DQ8WXI8 215 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 AKR1B15C9JRZ8 316 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 NFIBO00712 420 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CUL4BQ13620 913 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MOGSQ13724 837 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TMEM132BQ14DG7 1078 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 IL17AQ16552 155 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CDKAL1Q5VV42 579 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MNS1Q8NEH6 495 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PKNOX2Q96KN3 472 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TRERF1Q96PN7 1200 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 AGTPBP1Q9UPW5 1226 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 RIPK3Q9Y572 518 aa16.76■□□□□ 0.27
CDK5RAP3-236ENST00000584991 LRRC10BA6NIK2 292 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 OAZ1P54368 228 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SPAG1Q07617 926 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SNAPC2Q13487 334 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ERCC6LQ2NKX8 1250 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-236ENST00000584991 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 LAD1O00515 517 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SLC37A4O43826 429 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CASQ1P31415 396 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PBX1P40424 430 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 USP11P51784 963 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 IRX3P78415 501 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ARHGAP4P98171 946 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PPP4R3AQ6IN85 833 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MCF2L2Q86YR7 1114 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PDILTQ8N807 584 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SYMPKQ92797 1274 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 DHX58Q96C10 678 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MED15Q96RN5 788 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 RMND1Q9NWS8 449 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ADD3Q9UEY8 706 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CCDC175P0C221 793 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SREBF1P36956 1147 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 HSD17B4P51659 736 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PLS1Q14651 629 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 USP49Q70CQ1 688 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CRYGNQ8WXF5 182 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 SAMSN1Q9NSI8 373 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ATP2A1O14983 1001 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MYL1P05976 194 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 FECHP22830 423 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PRPHP41219 470 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GPAT2Q6NUI2 795 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CNGA4Q8IV77 575 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GPR161Q8N6U8 529 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 EPSTI1Q96J88 318 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms