RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 PIK3CDO00329 1044 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 MEIS2O14770 477 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 RGS20O76081 388 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 PFKMP08237 780 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 MMP3P08254 477 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 PSMA5P28066 241 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 CDC27P30260 824 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 PGM5Q15124 567 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 RTN1Q16799 776 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 CCDC82Q8N4S0 544 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 IL31RAQ8NI17 732 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 COL25A1Q9BXS0 654 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-221ENST00000584888 ZSWIM6Q9HCJ5 1215 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 SEC63Q9UGP8 760 aaKnown RBP20.56■□□□□ 0.88
ERBB2-221ENST00000584888 SLC4A7Q9Y6M7 1214 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 NID2Q14112 1375 aa20.56■□□□□ 0.88
ERBB2-221ENST00000584888 CDH23Q9H251 3354 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 hCG_1642624A0A1W2PR95 340 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
ERBB2-221ENST00000584888 EVCP57679 992 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 APOBRQ0VD83 1088 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 DEFB128Q7Z7B8 93 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 RETREG2Q8NC44 543 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 KAT2BQ92831 832 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 TM6SF1Q9BZW5 370 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 YBX2Q9Y2T7 364 aaKnown RBP20.55■□□□□ 0.88
ERBB2-221ENST00000584888 CUL9Q8IWT3 2517 aa20.55■□□□□ 0.88
ERBB2-221ENST00000584888 PITPNM1O00562 1244 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 IQCF3P0C7M6 154 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-221ENST00000584888 FCHSD1Q86WN1 690 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 BRF1Q92994 677 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 EMID1Q96A84 441 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-221ENST00000584888 NKX2-4Q9H2Z4 354 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 PRDM12Q9H4Q4 367 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 NOD1Q9Y239 953 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 MRVI1Q9Y6F6 885 aa20.54■□□□□ 0.88
ERBB2-221ENST00000584888 MYO9BQ13459 2157 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 GOLGA8AA7E2F4 631 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 ZBBXA8MT70 800 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 RFC2P35250 354 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 ADD1P35611 737 aaKnown RBP20.53■□□□□ 0.88
ERBB2-221ENST00000584888 RABGGTBP53611 331 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 BFSP2Q13515 415 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 LAMC2Q13753 1193 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 PTGISQ16647 500 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 DGKDQ16760 1214 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 USP17L6PQ6QN14 398 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 RUFY3Q7L099 469 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 SESTD1Q86VW0 696 aa20.53■□□□□ 0.88
ERBB2-221ENST00000584888 MRPS9P82933 396 aaKnown RBP20.52■□□□□ 0.88
ERBB2-221ENST00000584888 GDF6Q6KF10 455 aaPredicted RBP20.52■□□□□ 0.88
ERBB2-221ENST00000584888 DHX37Q8IY37 1157 aaKnown RBP20.52■□□□□ 0.88
ERBB2-221ENST00000584888 USP38Q8NB14 1042 aa20.52■□□□□ 0.88
ERBB2-221ENST00000584888 CTAGE1Q96RT6 745 aa20.52■□□□□ 0.88
ERBB2-221ENST00000584888 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.88
ERBB2-221ENST00000584888 PSTPIP2Q9H939 334 aa20.52■□□□□ 0.88
ERBB2-221ENST00000584888 SLC28A3Q9HAS3 691 aa20.52■□□□□ 0.88
ERBB2-221ENST00000584888 V9GY48 417 aaPredicted RBP20.52■□□□□ 0.88
ERBB2-221ENST00000584888 UNC80Q8N2C7 3258 aa20.52■□□□□ 0.87
ERBB2-221ENST00000584888 ATP2A2P16615 1042 aaKnown RBP20.51■□□□□ 0.87
ERBB2-221ENST00000584888 CCND2P30279 289 aa20.51■□□□□ 0.87
ERBB2-221ENST00000584888 FGD1P98174 961 aa20.51■□□□□ 0.87
ERBB2-221ENST00000584888 TOB2Q14106 344 aaPredicted RBP20.51■□□□□ 0.87
ERBB2-221ENST00000584888 WWC2Q6AWC2 1192 aa20.51■□□□□ 0.87
ERBB2-221ENST00000584888 TYW1BQ6NUM6 668 aa20.51■□□□□ 0.87
ERBB2-221ENST00000584888 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
ERBB2-221ENST00000584888 TGFB3P10600 412 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 ACTN1P12814 892 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 MYOGP15173 224 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.87
ERBB2-221ENST00000584888 NTRK3Q16288 839 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 KCNV1Q6PIU1 500 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 SMARCC2Q8TAQ2 1214 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 GPKOWQ92917 476 aaPredicted RBP eCLIP20.5■□□□□ 0.87
ERBB2-221ENST00000584888 CUL5Q93034 780 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 ZFP91Q96JP5 570 aaPredicted RBP20.5■□□□□ 0.87
ERBB2-221ENST00000584888 FTOQ9C0B1 505 aaKnown RBP eCLIP20.5■□□□□ 0.87
ERBB2-221ENST00000584888 PCDHA11Q9Y5I1 949 aa20.5■□□□□ 0.87
ERBB2-221ENST00000584888 SCN5AQ14524 2016 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 CCDC196A0A1B0GTZ2 297 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 STAM2O75886 525 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
ERBB2-221ENST00000584888 ICAM3P32942 547 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 PSEN2P49810 448 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 SP2Q02086 613 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 ADGRE1Q14246 886 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
ERBB2-221ENST00000584888 XRRA1Q6P2D8 792 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 HEATR3Q7Z4Q2 680 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 TEX2Q8IWB9 1127 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 C7orf31Q8N865 590 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 CAGE1Q8TC20 777 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 INPP4AQ96PE3 977 aaPredicted RBP20.49■□□□□ 0.87
ERBB2-221ENST00000584888 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 HDAC6Q9UBN7 1215 aa20.49■□□□□ 0.87
ERBB2-221ENST00000584888 GTF2IRD1Q9UHL9 959 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms