RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PSEN2P49810 448 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 FUT2Q10981 343 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 KRT32Q14532 448 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 DGKDQ16760 1214 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 RTN1Q16799 776 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 TYW1BQ6NUM6 668 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 PSRC1Q6PGN9 363 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-208ENST00000584773 OTOP2Q7RTS6 562 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 CUL5Q93034 780 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 FAM217BQ9NTX9 383 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-208ENST00000584773 NAP1L2Q9ULW6 460 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-208ENST00000584773 TANC1Q9C0D5 1861 aa20.76■□□□□ 0.91
SRSF1-208ENST00000584773 GOLGA8AA7E2F4 631 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 SUPT20HL2P0C7V6 817 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 APOBRQ0VD83 1088 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 RASIP1Q5U651 963 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 WWC2Q6AWC2 1192 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 INPP4AQ96PE3 977 aaPredicted RBP20.75■□□□□ 0.91
SRSF1-208ENST00000584773 PSTPIP2Q9H939 334 aa20.75■□□□□ 0.91
SRSF1-208ENST00000584773 GBF1Q92538 1859 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 PBX2P40425 430 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 MFSD10Q14728 455 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 PTGISQ16647 500 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 Q6ZUG5 572 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 DEFB128Q7Z7B8 93 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 RBM28Q9NW13 759 aaKnown RBP20.74■□□□□ 0.91
SRSF1-208ENST00000584773 HDAC6Q9UBN7 1215 aa20.74■□□□□ 0.91
SRSF1-208ENST00000584773 TET1Q8NFU7 2136 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.73■□□□□ 0.91
SRSF1-208ENST00000584773 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.73■□□□□ 0.91
SRSF1-208ENST00000584773 F2P00734 622 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 FGBP02675 491 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 ZNF200P98182 395 aaPredicted RBP20.73■□□□□ 0.91
SRSF1-208ENST00000584773 PTPN11Q06124 597 aaPredicted RBP20.73■□□□□ 0.91
SRSF1-208ENST00000584773 HIC1Q14526 733 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 KIAA0753Q2KHM9 967 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 KCNV1Q6PIU1 500 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 HERVK_113Q902F9 699 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 DHX38Q92620 1227 aaKnown RBP20.73■□□□□ 0.91
SRSF1-208ENST00000584773 MLXIPQ9HAP2 919 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 NOD1Q9Y239 953 aa20.73■□□□□ 0.91
SRSF1-208ENST00000584773 SPATA31C2B4DYI2 1134 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 HAS3O00219 553 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 HOXD8P13378 290 aaPredicted RBP20.72■□□□□ 0.91
SRSF1-208ENST00000584773 DNAJB2P25686 324 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 ICAM3P32942 547 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 ADD1P35611 737 aaKnown RBP20.72■□□□□ 0.91
SRSF1-208ENST00000584773 FGD1P98174 961 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 GNPTABQ3T906 1256 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 PCNX4Q63HM2 1172 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 CYFIP1Q7L576 1253 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 SESTD1Q86VW0 696 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 BRF1Q92994 677 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 PGBD1Q96JS3 809 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 GTF2IRD1Q9UHL9 959 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 STXBP5LQ9Y2K9 1186 aa20.72■□□□□ 0.91
SRSF1-208ENST00000584773 V9GY48 417 aaPredicted RBP20.72■□□□□ 0.91
SRSF1-208ENST00000584773 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
SRSF1-208ENST00000584773 TGFB3P10600 412 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 SP4Q02446 784 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 BLOC1S2Q6QNY1 142 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 C7orf31Q8N865 590 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 WNT8BQ93098 351 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 CDX2Q99626 313 aaPredicted RBP20.71■□□□□ 0.91
SRSF1-208ENST00000584773 C16orf70Q9BSU1 422 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 PBX4Q9BYU1 374 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 PCDHA6Q9UN73 950 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 PCDHA8Q9Y5H6 950 aa20.71■□□□□ 0.91
SRSF1-208ENST00000584773 EYSQ5T1H1 3165 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 FIBPO43427 364 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 PPFIA3O75145 1194 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 STAM2O75886 525 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 IQCF3P0C7M6 154 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 RPS6KB1P23443 525 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 NAPAP54920 295 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 TRIM50Q86XT4 487 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 MYLIPQ8WY64 445 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 PKD2L1Q9P0L9 805 aa20.7■□□□□ 0.9
SRSF1-208ENST00000584773 STXBP3O00186 592 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 ATP9AO75110 1047 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 PPFIA4O75335 1185 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 REC8O95072 547 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 LGALS2P05162 132 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 ITGB5P18084 799 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
SRSF1-208ENST00000584773 GPR20Q99678 358 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 KATNAL1Q9BW62 490 aa20.69■□□□□ 0.9
SRSF1-208ENST00000584773 SPDYE3A6NKU9 549 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 ZBBXA8MT70 800 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 PITPNM1O00562 1244 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 ADAMTS3O15072 1205 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 RABGGTBP53611 331 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 METTL7BQ6UX53 244 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 RPUSD2Q8IZ73 545 aaKnown RBP20.68■□□□□ 0.9
SRSF1-208ENST00000584773 RETREG2Q8NC44 543 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 TIFAQ96CG3 184 aa20.68■□□□□ 0.9
SRSF1-208ENST00000584773 TMEM260Q9NX78 707 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms