RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 GDPD5Q8WTR4 605 aa19.29■□□□□ 0.68
CCDC57-219ENST00000584717 PDCD2LQ9BRP1 358 aa19.29■□□□□ 0.68
CCDC57-219ENST00000584717 IL25Q9H293 177 aa19.29■□□□□ 0.68
CCDC57-219ENST00000584717 CNNM2Q9H8M5 875 aa19.29■□□□□ 0.68
CCDC57-219ENST00000584717 HAS3O00219 553 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 RGS20O76081 388 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 PARNO95453 639 aaKnown RBP19.28■□□□□ 0.68
CCDC57-219ENST00000584717 HOXA13P31271 388 aaPredicted RBP19.28■□□□□ 0.68
CCDC57-219ENST00000584717 PTK7Q13308 1070 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 TRIM71Q2Q1W2 868 aaKnown RBP19.28■□□□□ 0.68
CCDC57-219ENST00000584717 ZNF618Q5T7W0 954 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 CYB5R4Q7L1T6 521 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 IL31RAQ8NI17 732 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 ZFP91Q96JP5 570 aaPredicted RBP19.28■□□□□ 0.68
CCDC57-219ENST00000584717 MAD2L2Q9UI95 211 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 MTUS1Q9ULD2 1270 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 COG5Q9UP83 839 aa19.28■□□□□ 0.68
CCDC57-219ENST00000584717 ZBTB5O15062 677 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 GGPS1O95749 300 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 GHRHRQ02643 423 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 HIC1Q14526 733 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 MBTPS1Q14703 1052 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 SEC23AQ15436 765 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 HSDL1Q3SXM5 330 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 MYSM1Q5VVJ2 828 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 FAM117BQ6P1L5 589 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 TRAF7Q6Q0C0 670 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 HOMER1Q86YM7 354 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 HLA-CQ95604 372 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 MTMR8Q96EF0 704 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 SPATA33Q96N06 139 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 PCDHA1Q9Y5I3 950 aa19.27■□□□□ 0.68
CCDC57-219ENST00000584717 ABHD14A-ACY1A0A1B0GW23 586 aa19.26■□□□□ 0.67
CCDC57-219ENST00000584717 GJB5O95377 273 aa19.26■□□□□ 0.67
CCDC57-219ENST00000584717 PGM5Q15124 567 aa19.26■□□□□ 0.67
CCDC57-219ENST00000584717 SLC35G1Q2M3R5 365 aa19.26■□□□□ 0.67
CCDC57-219ENST00000584717 CELF3Q5SZQ8 465 aaKnown RBP19.26■□□□□ 0.67
CCDC57-219ENST00000584717 STOX1Q6ZVD7 989 aa19.26■□□□□ 0.67
CCDC57-219ENST00000584717 GPKOWQ92917 476 aaPredicted RBP eCLIP19.26■□□□□ 0.67
CCDC57-219ENST00000584717 RAD9AQ99638 391 aa19.26■□□□□ 0.67
CCDC57-219ENST00000584717 BRWD1Q9NSI6 2320 aa19.25■□□□□ 0.67
CCDC57-219ENST00000584717 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
CCDC57-219ENST00000584717 UBA1P22314 1058 aaKnown RBP19.25■□□□□ 0.67
CCDC57-219ENST00000584717 SP2Q02086 613 aa19.25■□□□□ 0.67
CCDC57-219ENST00000584717 IKBKEQ14164 716 aa19.25■□□□□ 0.67
CCDC57-219ENST00000584717 VSIG10LQ86VR7 867 aa19.25■□□□□ 0.67
CCDC57-219ENST00000584717 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
CCDC57-219ENST00000584717 BAZ2BQ9UIF8 2168 aaKnown RBP19.25■□□□□ 0.67
CCDC57-219ENST00000584717 SIP14410 1827 aa19.24■□□□□ 0.67
CCDC57-219ENST00000584717 LINC01553A4QN01 128 aa19.24■□□□□ 0.67
CCDC57-219ENST00000584717 PALM3A6NDB9 673 aaPredicted RBP19.24■□□□□ 0.67
CCDC57-219ENST00000584717 PPFIA4O75335 1185 aa19.24■□□□□ 0.67
CCDC57-219ENST00000584717 KCNV1Q6PIU1 500 aa19.24■□□□□ 0.67
CCDC57-219ENST00000584717 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
CCDC57-219ENST00000584717 TGS1Q96RS0 853 aaKnown RBP19.24■□□□□ 0.67
CCDC57-219ENST00000584717 PIGSQ96S52 555 aa19.24■□□□□ 0.67
CCDC57-219ENST00000584717 MAP3K20Q9NYL2 800 aaKnown RBP19.24■□□□□ 0.67
CCDC57-219ENST00000584717 GCOM1H8Y6P7 765 aaPredicted RBP19.23■□□□□ 0.67
CCDC57-219ENST00000584717 EFCAB14O75071 495 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 LGR5O75473 907 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 POLR2MP0CAP2 368 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 CCND2P30279 289 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 THPOP40225 353 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 GRM4Q14833 912 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC57-219ENST00000584717 C16orf70Q9BSU1 422 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 SUGCTQ9HAC7 445 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 MLXIPQ9HAP2 919 aa19.23■□□□□ 0.67
CCDC57-219ENST00000584717 MICAL3Q7RTP6 2002 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 ERVK-21P61565 698 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 TRDNQ13061 729 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 SERINC5Q86VE9 423 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 C1QTNF1Q9BXJ1 281 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 BCAS3Q9H6U6 928 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 SENP2Q9HC62 589 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 LMCD1Q9NZU5 365 aa19.22■□□□□ 0.67
CCDC57-219ENST00000584717 C17orf102A2RUQ5 167 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 RSPH10B2B2RC85 870 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 IFIT3O14879 490 aaKnown RBP19.21■□□□□ 0.67
CCDC57-219ENST00000584717 RSPH10BP0C881 870 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 MYOCDQ8IZQ8 938 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 SAMD3Q8N6K7 520 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 DBF4BQ8NFT6 615 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 ATP6V0A1Q93050 837 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 EPHX3Q9H6B9 360 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 DOCK5Q9H7D0 1870 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 EMSYQ7Z589 1322 aa19.21■□□□□ 0.67
CCDC57-219ENST00000584717 H3BRB1 525 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 CYTH3O43739 400 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 AMHP03971 560 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 LGALS2P05162 132 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 TGFB3P10600 412 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
CCDC57-219ENST00000584717 C17orf80Q9BSJ5 609 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 TUT1Q9H6E5 874 aaKnown RBP19.2■□□□□ 0.66
CCDC57-219ENST00000584717 TAF6LQ9Y6J9 622 aa19.2■□□□□ 0.66
CCDC57-219ENST00000584717 NOP56O00567 594 aaKnown RBP19.19■□□□□ 0.66
CCDC57-219ENST00000584717 TREHO43280 583 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms