RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
CSNK1D-224ENST00000584672 TAAR1Q96RJ0 339 aa16.62■□□□□ 0.25
CSNK1D-224ENST00000584672 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
CSNK1D-224ENST00000584672 COL20A1Q9P218 1284 aa16.62■□□□□ 0.25
CSNK1D-224ENST00000584672 KMT2EQ8IZD2 1858 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 RSPH10B2B2RC85 870 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 LINC01565O15544 149 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 CTSHP09668 335 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 RSPH10BP0C881 870 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 POP1Q99575 1024 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 KATNAL1Q9BW62 490 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 ZDBF2Q9HCK1 2354 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
CSNK1D-224ENST00000584672 CFAP54Q96N23 3096 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 TMEM221A6NGB7 291 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 M0R296 226 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 STXBP3O00186 592 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 HAS3O00219 553 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 TBX10O75333 385 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 F2P00734 622 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 PDHBP11177 359 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 TCF15Q12870 199 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 ZMYM1Q5SVZ6 1142 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 EDAQ92838 391 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 IFIH1Q9BYX4 1025 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 WDR19Q8NEZ3 1342 aa16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 ZFHX2Q9C0A1 2572 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-224ENST00000584672 GRM6O15303 877 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 GFRA3O60609 400 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 GOLGA8HP0CJ92 632 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 EIF2AK2P19525 551 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 NOVP48745 357 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 STXBP2Q15833 593 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 TRIM67Q6ZTA4 783 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 SUGP1Q8IWZ8 645 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 SYTL5Q8TDW5 730 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 SEPT8Q92599 483 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 TOP1MTQ969P6 601 aa16.59■□□□□ 0.25
CSNK1D-224ENST00000584672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 MS4A1P11836 297 aa16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 SMAD4Q13485 552 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 CTC1Q2NKJ3 1217 aa16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 VPS53Q5VIR6 699 aa16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 FIBCD1Q8N539 461 aa16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 NSUN6Q8TEA1 469 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
CSNK1D-224ENST00000584672 MYH6P13533 1939 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 COL4A6Q14031 1691 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 SERINC5Q86VE9 423 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 CD207Q9UJ71 328 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 PNMA2Q9UL42 364 aa16.57■□□□□ 0.24
CSNK1D-224ENST00000584672 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
CSNK1D-224ENST00000584672 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
CSNK1D-224ENST00000584672 ORC4O43929 436 aa16.56■□□□□ 0.24
CSNK1D-224ENST00000584672 NDUFV1P49821 464 aa16.56■□□□□ 0.24
CSNK1D-224ENST00000584672 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
CSNK1D-224ENST00000584672 TREHO43280 583 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 NCK2O43639 380 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 VCPP55072 806 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 CDC37Q16543 378 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 HSDL1Q3SXM5 330 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 BMP8AQ7Z5Y6 402 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 FBXL6Q8N531 539 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 IL17RAQ96F46 866 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 SPATA33Q96N06 139 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 C11orf84Q9BUA3 381 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 ALG13Q9NP73 1137 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 ANAPC4Q9UJX5 808 aa16.55■□□□□ 0.24
CSNK1D-224ENST00000584672 GGPS1O95749 300 aa16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 MYCLP12524 364 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 BMPR1AP36894 532 aa16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 ZXDAP98168 799 aa16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 OTUD7AQ8TE49 926 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 ATOH1Q92858 354 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-224ENST00000584672 ABCB11O95342 1321 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 PLXNA3P51805 1871 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 NR3C2P08235 984 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 LINC00271P0C7V0 271 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 SMIM10L2AP0DMW4 78 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 SMIM10L2BP0DMW5 78 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 SNHG28P0DPA3 235 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 HAND2P61296 217 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 MYSM1Q5VVJ2 828 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 MIER1Q8N108 512 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms