RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CBFA2T2O43439 604 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 TBCAO75347 108 aaKnown RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 PGK2P07205 417 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 ZNF569Q5MCW4 686 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 HAS1Q92839 578 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 RNF19AQ9NV58 838 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 TUBE1Q9UJT0 475 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 CASP5P51878 434 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 PDXDC2PQ6P474 469 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 KIAA1328Q86T90 577 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 FAM151AQ8WW52 585 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 MMTAG2Q9BU76 263 aaKnown RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 R3HDMLQ9H3Y0 253 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 NRAPQ86VF7 1730 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 KLRG2A4D1S0 409 aaPredicted RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 ZMYND10O75800 440 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 CXCR5P32302 372 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 CAP2P40123 477 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 SPATA1Q5VX52 437 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 RRAGAQ7L523 313 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 SFR1Q86XK3 245 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 DDX60Q8IY21 1712 aaKnown RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 COPB1P53618 953 aaKnown RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 IGBP1P78318 339 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 CCZ1BP86790 482 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 ELF2Q15723 593 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 LMBRD2Q68DH5 695 aaPredicted RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 RBM43Q6ZSC3 357 aaKnown RBP11.44□□□□□ -0.58
RFFL-212ENST00000584655 TUBGCP2Q9BSJ2 902 aa11.44□□□□□ -0.58
RFFL-212ENST00000584655 MEIS2O14770 477 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 BMP15O95972 392 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 ACTN1P12814 892 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 ERCC6LQ2NKX8 1250 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 SEZ6Q53EL9 994 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 ARHGEF16Q5VV41 709 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 C4orf32Q8N8J7 132 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 RMDN3Q96TC7 470 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 LZTS2Q9BRK4 669 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 MTFR1LQ9H019 292 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 GOLPH3Q9H4A6 298 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 FAM13AO94988 1023 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 ASNSP08243 561 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 COG2Q14746 738 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 TNIP1Q15025 636 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
RFFL-212ENST00000584655 CATSPER3Q86XQ3 398 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 PNMA5Q96PV4 448 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 CARD6Q9BX69 1037 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 DNM3Q9UQ16 869 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 DUSP10Q9Y6W6 482 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 TUBGCP6Q96RT7 1819 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 AKR1B15C9JRZ8 316 aaPredicted RBP11.43□□□□□ -0.58
RFFL-212ENST00000584655 SRGAP2O75044 1071 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 MYBP10242 640 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 RPS6P62753 249 aaKnown RBP11.43□□□□□ -0.58
RFFL-212ENST00000584655 ARHGAP44Q17R89 818 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 FAM26FQ5R3K3 315 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 GJB7Q6PEY0 223 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 SUGCTQ9HAC7 445 aa11.43□□□□□ -0.58
RFFL-212ENST00000584655 PAPPAQ13219 1627 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 MSH4O15457 936 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 BUB1O43683 1085 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 RHOXF2BP0C7M4 288 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 MRFAP1L1Q96HT8 127 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 PPP1R13BQ96KQ4 1090 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 RHOXF2Q9BQY4 288 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 CACNA1SQ13698 1873 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 VIL1P09327 827 aaKnown RBP11.42□□□□□ -0.58
RFFL-212ENST00000584655 CNTN2Q02246 1040 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 WDR24Q96S15 920 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 SMARCAL1Q9NZC9 954 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 CALCAP01258 141 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 TRIM49P0CI25 452 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 TRIM49CP0CI26 452 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 C9orf131Q5VYM1 1079 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 TRERF1Q96PN7 1200 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 GSDMAQ96QA5 445 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 C4AP0C0L4 1744 aa11.42□□□□□ -0.58
RFFL-212ENST00000584655 TTC26A0AVF1 554 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 AKR1B10O60218 316 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 LRRN2O75325 713 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 CASP4P49662 377 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 OSTNP61366 133 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 AMPD3Q01432 767 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 FSTL1Q12841 308 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
RFFL-212ENST00000584655 ZNF771Q7L3S4 317 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms