RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 ACAD9Q9H845 621 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
CCDC47-206ENST00000584112 TRMT13Q9NUP7 481 aaKnown RBP13.08□□□□□ -0.32
CCDC47-206ENST00000584112 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
CCDC47-206ENST00000584112 CEP295Q9C0D2 2601 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 TBX10O75333 385 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 LMNAP02545 664 aaKnown RBP13.07□□□□□ -0.32
CCDC47-206ENST00000584112 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC47-206ENST00000584112 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
CCDC47-206ENST00000584112 HAND2P61296 217 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 CBX2Q14781 532 aaPredicted RBP13.07□□□□□ -0.32
CCDC47-206ENST00000584112 PTPROQ16827 1216 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 CTC1Q2NKJ3 1217 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 KIAA0319Q5VV43 1072 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 NSUN3Q9H649 340 aaKnown RBP13.07□□□□□ -0.32
CCDC47-206ENST00000584112 RNF146Q9NTX7 359 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
CCDC47-206ENST00000584112 NBEAQ8NFP9 2946 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 DCDC2BA2VCK2 349 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 ZNF213O14771 459 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 LINC01565O15544 149 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 ADRB1P08588 477 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 ALAS1P13196 640 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 PTGS1P23219 599 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
CCDC47-206ENST00000584112 ESR2Q92731 530 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 CHMP4CQ96CF2 233 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 TTC14Q96N46 770 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 RAD9AQ99638 391 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 TMEM47Q9BQJ4 181 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 ABHD16BQ9H3Z7 469 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 SPC25Q9HBM1 224 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
CCDC47-206ENST00000584112 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
CCDC47-206ENST00000584112 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
CCDC47-206ENST00000584112 TRIP12Q14669 1992 aaPredicted RBP13.05□□□□□ -0.32
CCDC47-206ENST00000584112 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 HYAL1Q12794 435 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 CCDC178Q5BJE1 867 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 TBC1D10CQ8IV04 446 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
CCDC47-206ENST00000584112 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 RALGAPA2Q2PPJ7 1873 aa13.05□□□□□ -0.32
CCDC47-206ENST00000584112 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 HELZ2Q9BYK8 2649 aaKnown RBP13.04□□□□□ -0.32
CCDC47-206ENST00000584112 ASB14A6NK59 587 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 GJB5O95377 273 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 ICAM1P05362 532 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 PTPN21Q16825 1174 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 SYDE2Q5VT97 1194 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 RASGRP2Q7LDG7 609 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 RPGRIP1Q96KN7 1286 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 FGD4Q96M96 766 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 ALDH8A1Q9H2A2 487 aaPredicted RBP13.04□□□□□ -0.32
CCDC47-206ENST00000584112 RANBP17Q9H2T7 1088 aaKnown RBP13.04□□□□□ -0.32
CCDC47-206ENST00000584112 R4GN57 208 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 ASTN1O14525 1302 aa13.04□□□□□ -0.32
CCDC47-206ENST00000584112 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
CCDC47-206ENST00000584112 BAIAP3O94812 1187 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 PDHBP11177 359 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 GPM6BQ13491 265 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
CCDC47-206ENST00000584112 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 CYP2W1Q8TAV3 490 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 IGFLR1Q9H665 355 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 NEDD4P46934 1319 aa13.03□□□□□ -0.32
CCDC47-206ENST00000584112 IQCF3P0C7M6 154 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 SNHG28P0DPA3 235 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 ICAM3P32942 547 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 RFC2P35250 354 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 SLC16A2P36021 539 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 SNAP25P60880 206 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 DMWDQ09019 674 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 GPATCH4Q5T3I0 446 aaKnown RBP13.02□□□□□ -0.33
CCDC47-206ENST00000584112 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
CCDC47-206ENST00000584112 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms