RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 YBX3P16989 372 aaKnown RBP eCLIP5.78□□□□□ -1.48
SKA2-210ENST00000584089 PMLP29590 882 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 NCKAP1LP55160 1127 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 SPIRE1Q08AE8 756 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 OTOP3Q7RTS5 596 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 AMIGO3Q86WK7 504 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 SLC7A14Q8TBB6 771 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 PHOSPHO1Q8TCT1 267 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 MAGEB10Q96LZ2 347 aaPredicted RBP5.78□□□□□ -1.48
SKA2-210ENST00000584089 SMOC1Q9H4F8 434 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 BCAS3Q9H6U6 928 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 SFMBT1Q9UHJ3 866 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 CNOT6Q9ULM6 557 aaKnown RBP5.78□□□□□ -1.48
SKA2-210ENST00000584089 PLA2G2DQ9UNK4 145 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 PCDHA8Q9Y5H6 950 aa5.78□□□□□ -1.48
SKA2-210ENST00000584089 ESYT3A0FGR9 886 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 DBX1A6NMT0 343 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 BUB1BO60566 1050 aaPredicted RBP5.77□□□□□ -1.49
SKA2-210ENST00000584089 GNAT1P11488 350 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 LINC00310P59036 64 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 FNDC3BQ53EP0 1204 aaKnown RBP5.77□□□□□ -1.49
SKA2-210ENST00000584089 HABP4Q5JVS0 413 aaKnown RBP5.77□□□□□ -1.49
SKA2-210ENST00000584089 HOMER1Q86YM7 354 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 MIB1Q86YT6 1006 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 PCDH19Q8TAB3 1148 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 PIP4K2CQ8TBX8 421 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 KCNJ15Q99712 375 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 NUB1Q9Y5A7 615 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 PCDHB4Q9Y5E5 795 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 PCDHA9Q9Y5H5 950 aa5.77□□□□□ -1.49
SKA2-210ENST00000584089 KRTAP9-6A0A140TA67 174 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 TCRBV5S2A0A599 114 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 RFXAPO00287 272 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 GSTA4O15217 222 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 RAPGEF3O95398 923 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 ATF2P15336 505 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 CACNB2Q08289 660 aaPredicted RBP5.76□□□□□ -1.49
SKA2-210ENST00000584089 SSPNQ14714 243 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 ZNF385BQ569K4 471 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 ETV3LQ6ZN32 361 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 B3GNT8Q7Z7M8 397 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 JAZF1Q86VZ6 243 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 CILP2Q8IUL8 1156 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 TRIM48Q8IWZ4 208 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 FAM126BQ8IXS8 530 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 TMEFF1Q8IYR6 380 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 UHMK1Q8TAS1 419 aaKnown RBP5.76□□□□□ -1.49
SKA2-210ENST00000584089 APPBP2Q92624 585 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 SCLYQ96I15 445 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 TOX2Q96NM4 488 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 NGRNQ9NPE2 291 aaKnown RBP5.76□□□□□ -1.49
SKA2-210ENST00000584089 MYOTQ9UBF9 498 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 FAN1Q9Y2M0 1017 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 KCTD3Q9Y597 815 aa5.76□□□□□ -1.49
SKA2-210ENST00000584089 MRPL42Q9Y6G3 142 aaKnown RBP5.76□□□□□ -1.49
SKA2-210ENST00000584089 ASMTLO95671 621 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 COL6A2P12110 1019 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 TCEA2Q15560 299 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 FAM47CQ5HY64 1035 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 C16orf59Q7L2K0 433 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 BRAPQ7Z569 592 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 ZC3H7AQ8IWR0 971 aaKnown RBP5.75□□□□□ -1.49
SKA2-210ENST00000584089 PANK1Q8TE04 598 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 PCDH18Q9HCL0 1135 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 TRIM39Q9HCM9 518 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 ASH2LQ9UBL3 628 aa5.75□□□□□ -1.49
SKA2-210ENST00000584089 PPP1R12AO14974 1030 aaPredicted RBP5.74□□□□□ -1.49
SKA2-210ENST00000584089 NKRFO15226 690 aaKnown RBP eCLIP5.74□□□□□ -1.49
SKA2-210ENST00000584089 RFPL3O75679 317 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 RASGRP1O95267 797 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 SRGAP2CP0DJJ0 459 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 PI3P19957 117 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 MC3RP41968 323 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 ST5P78524 1137 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 FOXO4P98177 505 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 CIAPIN1Q6FI81 312 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 CNKSR3Q6P9H4 555 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 ZC3H18Q86VM9 953 aaKnown RBP5.74□□□□□ -1.49
SKA2-210ENST00000584089 FAM129CQ86XR2 697 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 NLGN1Q8N2Q7 840 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 ARRDC4Q8NCT1 418 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 CLUHP3Q96NS8 147 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 YIPF4Q9BSR8 244 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 PDGFDQ9GZP0 370 aaPredicted RBP5.74□□□□□ -1.49
SKA2-210ENST00000584089 EPB41L4AQ9HCS5 686 aaPredicted RBP5.74□□□□□ -1.49
SKA2-210ENST00000584089 CATSPERZQ9NTU4 200 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 FANCLQ9NW38 375 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 DSEQ9UL01 958 aa5.74□□□□□ -1.49
SKA2-210ENST00000584089 TCRBV16S1A1N1A0A5B0 115 aa5.73□□□□□ -1.49
SKA2-210ENST00000584089 SLC27A2O14975 620 aa5.73□□□□□ -1.49
SKA2-210ENST00000584089 IGSF3O75054 1194 aa5.73□□□□□ -1.49
SKA2-210ENST00000584089 CDC45O75419 566 aa5.73□□□□□ -1.49
SKA2-210ENST00000584089 NPTXRO95502 500 aa5.73□□□□□ -1.49
SKA2-210ENST00000584089 C8BP07358 591 aa5.73□□□□□ -1.49
SKA2-210ENST00000584089 PYGMP11217 842 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms