RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 INPP4AQ96PE3 977 aaPredicted RBP24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 FAM217BQ9NTX9 383 aaPredicted RBP24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 NAP1L2Q9ULW6 460 aaPredicted RBP24.69■■□□□ 1.54
PPP4R1-228ENST00000584074 SPATA31C2B4DYI2 1134 aa24.68■■□□□ 1.54
PPP4R1-228ENST00000584074 STAM2O75886 525 aa24.68■■□□□ 1.54
PPP4R1-228ENST00000584074 UBE2SQ16763 222 aa24.68■■□□□ 1.54
PPP4R1-228ENST00000584074 PCNX4Q63HM2 1172 aa24.68■■□□□ 1.54
PPP4R1-228ENST00000584074 Q6ZUG5 572 aa24.68■■□□□ 1.54
PPP4R1-228ENST00000584074 PPP4R2Q9NY27 417 aa24.68■■□□□ 1.54
PPP4R1-228ENST00000584074 PPFIA4O75335 1185 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 HOXD8P13378 290 aaPredicted RBP24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 CDC27P30260 824 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 ICAM3P32942 547 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 PSEN2P49810 448 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 APOBRQ0VD83 1088 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 SEMA3FQ13275 785 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 ZNF697Q5TEC3 545 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 RASIP1Q5U651 963 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 WWC2Q6AWC2 1192 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 GDF6Q6KF10 455 aaPredicted RBP24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 BLOC1S2Q6QNY1 142 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 VWCEQ96DN2 955 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 MLXIPQ9HAP2 919 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 NOD1Q9Y239 953 aa24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 V9GY48 417 aaPredicted RBP24.67■■□□□ 1.54
PPP4R1-228ENST00000584074 F2P00734 622 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 MFSD10Q14728 455 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 PTGISQ16647 500 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 XRRA1Q6P2D8 792 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 SESTD1Q86VW0 696 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 BRF1Q92994 677 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 ALG1Q9BT22 464 aa24.66■■□□□ 1.54
PPP4R1-228ENST00000584074 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 FIBPO43427 364 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 FGBP02675 491 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 RPS6KB1P23443 525 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 ADD1P35611 737 aaKnown RBP24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 KIAA0753Q2KHM9 967 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 TYW1BQ6NUM6 668 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 C7orf31Q8N865 590 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 GUCD1Q96NT3 240 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 CTAGE1Q96RT6 745 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 CXXC1Q9P0U4 656 aaPredicted RBP24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 HDAC6Q9UBN7 1215 aa24.65■■□□□ 1.54
PPP4R1-228ENST00000584074 HAS3O00219 553 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 RCAN1P53805 252 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 CYFIP1Q7L576 1253 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 OTOP2Q7RTS6 562 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 HERVK_113Q902F9 699 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 KATNAL1Q9BW62 490 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 SEMA6BQ9H3T3 888 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 GTF2IRD1Q9UHL9 959 aa24.64■■□□□ 1.54
PPP4R1-228ENST00000584074 SPDYE3A6NKU9 549 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 GRXCR1A8MXD5 290 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 PITPNM1O00562 1244 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 METAP2P50579 478 aaKnown RBP eCLIP24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 NAPAP54920 295 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 NEDD9Q14511 834 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 RPUSD2Q8IZ73 545 aaKnown RBP24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 C16orf70Q9BSU1 422 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 TTYH1Q9H313 450 aaPredicted RBP24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 PCDHA6Q9UN73 950 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 STXBP5LQ9Y2K9 1186 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 PCDHA8Q9Y5H6 950 aa24.63■■□□□ 1.53
PPP4R1-228ENST00000584074 STXBP3O00186 592 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 PSMA5P28066 241 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 BFSP2Q13515 415 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 ERICH6BQ5W0A0 696 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 METTL7BQ6UX53 244 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 DEFB128Q7Z7B8 93 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 RETREG2Q8NC44 543 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 TELO2Q9Y4R8 837 aa24.62■■□□□ 1.53
PPP4R1-228ENST00000584074 NOP56O00567 594 aaKnown RBP24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 IQCF3P0C7M6 154 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 ITGB5P18084 799 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 DNAJB2P25686 324 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 NLRX1Q86UT6 975 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 FBXL16Q8N461 479 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 USP26Q9BXU7 913 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 AGXT2Q9BYV1 514 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 RIC8AQ9NPQ8 531 aa24.61■■□□□ 1.53
PPP4R1-228ENST00000584074 CDH23Q9H251 3354 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 CCDC196A0A1B0GTZ2 297 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 EPB41L2O43491 1005 aaKnown RBP24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 PBX2P40425 430 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 ZNF200P98182 395 aaPredicted RBP24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 HIC1Q14526 733 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 PPP1R18Q6NYC8 613 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 DHX38Q92620 1227 aaKnown RBP24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 GPR20Q99678 358 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 SENP7Q9BQF6 1050 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 MTIF3Q9H2K0 278 aaKnown RBP24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 BARHL2Q9NY43 387 aa24.6■■□□□ 1.53
PPP4R1-228ENST00000584074 MYH7BA7E2Y1 1941 aa24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 H3BRB1 525 aa24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 ATP9AO75110 1047 aa24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 LGALS2P05162 132 aa24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 SP4Q02446 784 aa24.59■■□□□ 1.53
PPP4R1-228ENST00000584074 GPRASP2Q96D09 838 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms