RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 USP6NLQ92738 828 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 SLC5A5Q92911 643 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 AK8Q96MA6 479 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 APBA2Q99767 749 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 NUDT12Q9BQG2 462 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 RAB34Q9BZG1 259 aa18.9■□□□□ 0.62
CDK5RAP3-230ENST00000584042 FAM237AA0A1B0GTK4 181 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CMA1P23946 247 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CTGFP29279 349 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ICAM3P32942 547 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 RGS2P41220 211 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 MAP2K1Q02750 393 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GRIN1Q05586 938 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 KIF22Q14807 665 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 IL17AQ16552 155 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 RESP18Q5W5W9 173 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 MAMDC4Q6UXC1 1216 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ARMCX2Q7L311 632 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 IGSF22Q8N9C0 903 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 MAML3Q96JK9 1138 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CLIC6Q96NY7 704 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CSRNP2Q9H175 543 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 KCNH7Q9NS40 1196 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SYNGAP1Q96PV0 1343 aa18.89■□□□□ 0.61
CDK5RAP3-230ENST00000584042 MARCH6O60337 910 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 RGS20O76081 388 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TXKP42681 527 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PSMC4P43686 418 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SHC4Q6S5L8 630 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 FSIP1Q8NA03 581 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 RIT2Q99578 217 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TTC12Q9H892 705 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 AGO4Q9HCK5 861 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 VAV3Q9UKW4 847 aa18.88■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GPR25O00155 361 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 IPO5O00410 1097 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ARP10275 920 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SEMA3FQ13275 785 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 IRF5Q13568 498 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 LRCH2Q5VUJ6 765 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CCDC73Q6ZRK6 1079 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 NPLOC4Q8TAT6 608 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GJD2Q9UKL4 321 aa18.87■□□□□ 0.61
CDK5RAP3-230ENST00000584042 NFASCO94856 1347 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GAS7O60861 476 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PSMD10O75832 226 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TXLNAP40222 546 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SPIRE1Q08AE8 756 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PPP2R5CQ13362 524 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PDIA5Q14554 519 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SKOR2Q2VWA4 1001 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GPT2Q8TD30 523 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ZFP91Q96JP5 570 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TEKT3Q9BXF9 490 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ARHGAP39Q9C0H5 1083 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 FAM13BQ9NYF5 915 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PCDHA12Q9UN75 941 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 HPSEQ9Y251 543 aa18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 DDX49Q9Y6V7 483 aaKnown RBP18.86■□□□□ 0.61
CDK5RAP3-230ENST00000584042 POTEMA6NI47 508 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SLC26A4O43511 780 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 XRCC5P13010 732 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PFKFB1P16118 471 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 KCNA2P16389 499 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TECP42680 631 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 FAM160A1Q05DH4 1040 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ITGB3BPQ13352 177 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 KCNV1Q6PIU1 500 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TINF2Q9BSI4 451 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 BEGAINQ9BUH8 593 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CCSER1Q9C0I3 900 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GOLPH3LQ9H4A5 285 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 TBC1D22BQ9NU19 505 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 STK24Q9Y6E0 443 aa18.85■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GNRH1P01148 92 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 B3GNT9Q6UX72 402 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 FBXO16Q8IX29 292 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 GJA10Q969M2 543 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 SENP7Q9BQF6 1050 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 PYM1Q9BRP8 204 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 KATNBL1Q9H079 304 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 DOCK5Q9H7D0 1870 aa18.84■□□□□ 0.61
CDK5RAP3-230ENST00000584042 A0A1B0GVL5 298 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 DHX15O43143 795 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 FKTNO75072 461 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 IGHA2P01877 340 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 TGFB3P10600 412 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 LIG1P18858 919 aa18.83■□□□□ 0.6
CDK5RAP3-230ENST00000584042 KRT76Q01546 638 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms