RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CYP2W1Q8TAV3 490 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 LENG9Q96B70 501 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 USP28Q96RU2 1077 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.29
CDRT1-207ENST00000583965 KAT6AQ92794 2004 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SLC37A4O43826 429 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 GRK4P32298 578 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 CYP2C19P33261 490 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 PRPHP41219 470 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 DNM1Q05193 864 aaKnown RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 PTGDRQ13258 359 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 NBR1Q14596 966 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 CALCRLQ16602 461 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 GIMAP8Q8ND71 665 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 SCAND2PQ9GZW5 306 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
CDRT1-207ENST00000583965 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
CDRT1-207ENST00000583965 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 MSH4O15457 936 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 OR52Z1P0C646 297 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ARP10275 920 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 CYBAP13498 195 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ELNP15502 786 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ATP2C1P98194 919 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 SEMA3FQ13275 785 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 SLC39A14Q15043 492 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 PTPAQ15257 358 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ARL6IP4Q66PJ3 421 aaKnown RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 C4orf32Q8N8J7 132 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 AGO4Q9HCK5 861 aaKnown RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-207ENST00000583965 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
CDRT1-207ENST00000583965 NFASCO94856 1347 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 MARCH6O60337 910 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 ZNF865P0CJ78 1059 aaPredicted RBP13.18□□□□□ -0.3
CDRT1-207ENST00000583965 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
CDRT1-207ENST00000583965 CACNB2Q08289 660 aaPredicted RBP13.18□□□□□ -0.3
CDRT1-207ENST00000583965 NEDD9Q14511 834 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 STK38Q15208 465 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
CDRT1-207ENST00000583965 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 HAS1Q92839 578 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 SLC5A5Q92911 643 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 RIT2Q99578 217 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDRT1-207ENST00000583965 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
CDRT1-207ENST00000583965 RCOR1Q9UKL0 485 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 FAM184BQ9ULE4 1060 aa13.18□□□□□ -0.3
CDRT1-207ENST00000583965 SPTLC2O15270 562 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 PPP6R2O75170 966 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 INHAP05111 366 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
CDRT1-207ENST00000583965 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
CDRT1-207ENST00000583965 AKR1A1P14550 325 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 KCNA2P16389 499 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
CDRT1-207ENST00000583965 NFKBIBQ15653 356 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 DUSP28Q4G0W2 176 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 SPATA32Q96LK8 384 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms