RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 COL4A4P53420 1690 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 BDP1A6H8Y1 2624 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 MPHOSPH10O00566 681 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 MBD4O95243 580 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 THBS1P07996 1170 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 ADD2P35612 726 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 CCNA1P78396 465 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 GRIN2CQ14957 1233 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 C11orf91Q3C1V1 193 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 ZNF792Q3KQV3 632 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 CCSAPQ6IQ19 270 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 C16orf59Q7L2K0 433 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 RASGRP2Q7LDG7 609 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 DPP9Q86TI2 863 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 TET1Q8NFU7 2136 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 MAFAQ8NHW3 353 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 VWCEQ96DN2 955 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 VCPKMTQ9H867 229 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 EGFL7Q9UHF1 273 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 RAPGEFL1Q9UHV5 662 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 TANC1Q9C0D5 1861 aa9.51□□□□□ -0.89
PPP4R1-225ENST00000583438 NCOR1O75376 2440 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 A0A1W2PNR3 127 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 GRXCR1A8MXD5 290 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 CTAGE5O15320 804 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 MSCO60682 206 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 ICMTO60725 284 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 FLOT1O75955 427 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 POLR3DP05423 398 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 EEF2P13639 858 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 CDK8P49336 464 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 ICA1Q05084 483 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 FAAP100Q0VG06 881 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 PLS1Q14651 629 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 TMEM63BQ5T3F8 832 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 C12orf60Q5U649 245 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 RIPOR1Q6ZS17 1223 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 TMEM179Q6ZVK1 233 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 NCAPG2Q86XI2 1143 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 SUSD3Q96L08 255 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 DNAJC2Q99543 621 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 PUS7LQ9H0K6 701 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 ASTN1O14525 1302 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 SYNRGQ9UMZ2 1314 aa9.5□□□□□ -0.89
PPP4R1-225ENST00000583438 ATG2AQ2TAZ0 1938 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 VWA5AO00534 786 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 KIAA0355O15063 1070 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 GLRX3O76003 335 aaKnown RBP9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 SNAI1O95863 264 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 ECM1Q16610 540 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 FAM83BQ5T0W9 1011 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 LRRC69Q6ZNQ3 347 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 C16orf86Q6ZW13 317 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 KLHDC9Q8NEP7 349 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 LBHD1Q9BQE6 289 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 CRNKL1Q9BZJ0 848 aaKnown RBP9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 KATNBL1Q9H079 304 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 EPB41L4AQ9HCS5 686 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 CABP5Q9NP86 173 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 XPNPEP3Q9NQH7 507 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 TBX21Q9UL17 535 aa9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 GPC6Q9Y625 555 aaPredicted RBP9.49□□□□□ -0.89
PPP4R1-225ENST00000583438 DNAJC25-GNG10A0A024R161 153 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 KBTBD13C9JR72 458 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 H3BRB1 525 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 ZBTB39O15060 712 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 WDR46O15213 610 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 STRNO43815 780 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 SMARCA5O60264 1052 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 PQBP1O60828 265 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 IGSF3O75054 1194 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 PPFIA3O75145 1194 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 SMAD3P84022 425 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 DBN1Q16643 649 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 CTR9Q6PD62 1173 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 RIOX2Q8IUF8 465 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 ETFBKMTQ8IXQ9 262 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 ABRAQ8N0Z2 381 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 PGBD3Q8N328 593 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 MMP19Q99542 508 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 TINF2Q9BSI4 451 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 BCL11AQ9H165 835 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 TUT1Q9H6E5 874 aaKnown RBP9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 STIM2Q9P246 746 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 PPP1R9AQ9ULJ8 1098 aa9.48□□□□□ -0.89
PPP4R1-225ENST00000583438 TACC3Q9Y6A5 838 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms