RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 PDE4DQ08499 809 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 ARHGEF6Q15052 776 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 PRR16Q569H4 304 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 AXDND1Q5T1B0 1012 aaPredicted RBP15.48■□□□□ 0.07
ITGB4-209ENST00000583327 TAPT1Q6NXT6 567 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 B3GNT9Q6UX72 402 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 PLA2G4DQ86XP0 818 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 KCNG4Q8TDN1 519 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 SLC5A5Q92911 643 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 AGO4Q9HCK5 861 aaKnown RBP15.48■□□□□ 0.07
ITGB4-209ENST00000583327 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.48■□□□□ 0.07
ITGB4-209ENST00000583327 TSKSQ9UJT2 592 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 SRPRBQ9Y5M8 271 aaKnown RBP15.48■□□□□ 0.07
ITGB4-209ENST00000583327 LRRC37A2A6NM11 1700 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 PLXNA1Q9UIW2 1896 aa15.48■□□□□ 0.07
ITGB4-209ENST00000583327 ATP9AO75110 1047 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 PSMD10O75832 226 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 OR52Z1P0C646 297 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 MTMR1Q13613 665 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 STK38Q15208 465 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 CCL14Q16627 93 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 CCDC62Q6P9F0 684 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 NLRX1Q86UT6 975 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 TRMT44Q8IYL2 757 aaKnown RBP15.47■□□□□ 0.07
ITGB4-209ENST00000583327 DOCK3Q8IZD9 2030 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 FERMT2Q96AC1 680 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 CDHR1Q96JP9 859 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 SPATA32Q96LK8 384 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 GBP4Q96PP9 640 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 RIT2Q99578 217 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 SENP7Q9BQF6 1050 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 ABHD16BQ9H3Z7 469 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 VTA1Q9NP79 307 aa15.47■□□□□ 0.07
ITGB4-209ENST00000583327 FIBPO43427 364 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 ECM2O94769 699 aaPredicted RBP15.46■□□□□ 0.07
ITGB4-209ENST00000583327 HSPA8P11142 646 aaKnown RBP15.46■□□□□ 0.07
ITGB4-209ENST00000583327 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
ITGB4-209ENST00000583327 SPIRE1Q08AE8 756 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 PDIA5Q14554 519 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 CALCRLQ16602 461 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 GNPTABQ3T906 1256 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 ADALQ6DHV7 355 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 KCNV1Q6PIU1 500 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 SLFN12Q8IYM2 578 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
ITGB4-209ENST00000583327 PXYLP1Q8TE99 480 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 GDPD2Q9HCC8 539 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 NRBP1Q9UHY1 535 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 PCDHA7Q9UN72 937 aa15.46■□□□□ 0.07
ITGB4-209ENST00000583327 NFASCO94856 1347 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 IPO5O00410 1097 aaKnown RBP15.45■□□□□ 0.06
ITGB4-209ENST00000583327 ZNF865P0CJ78 1059 aaPredicted RBP15.45■□□□□ 0.06
ITGB4-209ENST00000583327 KCNA2P16389 499 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 MARCKSP29966 332 aaPredicted RBP15.45■□□□□ 0.06
ITGB4-209ENST00000583327 SP2Q02086 613 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 GRIN1Q05586 938 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 ITGB3BPQ13352 177 aaPredicted RBP15.45■□□□□ 0.06
ITGB4-209ENST00000583327 ACVR2BQ13705 512 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 OTOP1Q7RTM1 612 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 IGSF22Q8N9C0 903 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 KRI1Q8N9T8 703 aaKnown RBP15.45■□□□□ 0.06
ITGB4-209ENST00000583327 TRIB2Q92519 343 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 LMBRD1Q9NUN5 540 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 DDX41Q9UJV9 622 aaKnown RBP15.45■□□□□ 0.06
ITGB4-209ENST00000583327 VAV3Q9UKW4 847 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 PCDHA12Q9UN75 941 aa15.45■□□□□ 0.06
ITGB4-209ENST00000583327 FAM237AA0A1B0GTK4 181 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 FOXN1O15353 648 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 CUTAO60888 179 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 ARIH2O95376 493 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 NCLP19338 710 aaKnown RBP15.44■□□□□ 0.06
ITGB4-209ENST00000583327 MCM4P33991 863 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 TXKP42681 527 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 IQSEC1Q6DN90 963 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 DTHD1Q6ZMT9 781 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 GJA10Q969M2 543 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 ZNF577Q9BSK1 485 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 TTC12Q9H892 705 aaPredicted RBP15.44■□□□□ 0.06
ITGB4-209ENST00000583327 PDGFCQ9NRA1 345 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 TBC1D22BQ9NU19 505 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 TCHHQ07283 1943 aa15.44■□□□□ 0.06
ITGB4-209ENST00000583327 A0A1W2PQ27 194 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 A0A1W2PQ64 194 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 A0A1W2PQD8 194 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 CYP2C19P33261 490 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 LONP1P36776 959 aaKnown RBP15.43■□□□□ 0.06
ITGB4-209ENST00000583327 PPP2R5CQ13362 524 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 MAP3K21Q5TCX8 1036 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 SEPT14Q6ZU15 432 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 EEPD1Q7L9B9 569 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 FBXO16Q8IX29 292 aaPredicted RBP15.43■□□□□ 0.06
ITGB4-209ENST00000583327 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 CLIC6Q96NY7 704 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 BCAS3Q9H6U6 928 aa15.43■□□□□ 0.06
ITGB4-209ENST00000583327 CASP8AP2Q9UKL3 1982 aa15.42■□□□□ 0.06
ITGB4-209ENST00000583327 CMA1P23946 247 aa15.42■□□□□ 0.06
ITGB4-209ENST00000583327 TECP42680 631 aa15.42■□□□□ 0.06
ITGB4-209ENST00000583327 PRAMEF19Q5SWL8 479 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms