RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	MAP4K3	Q8IVH8	894 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	WDR66	Q8TBY9	1149 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	LPAR1	Q92633	364 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	SNX27	Q96L92	541 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	PUS3	Q9BZE2	481 aa	Known RBP	9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	ZNF576	Q9H609	170 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	USP40	Q9NVE5	1235 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	DZANK1	Q9NVP4	752 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	DOCK1	Q14185	1865 aa		9.64	□□□□□ -0.87
NCOR1-223	ENST00000583226	REV3L	O60673	3130 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	LOC285556	D6RIA3	1793 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	KIF16B	Q96L93	1317 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	PDE2A	O00408	941 aa	Predicted RBP	9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	NOS3	P29474	1203 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	RGS2	P41220	211 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	SPP2	Q13103	211 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	CCL14	Q16627	93 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	GJD3	Q8N144	294 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	GALNT11	Q8NCW6	608 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	GPRC5A	Q8NFJ5	357 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	CCER1	Q8TC90	406 aa	Predicted RBP	9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	RNPC3	Q96LT9	517 aa	Known RBP	9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	OSMR	Q99650	979 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	APBA2	Q99767	749 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	IDI2	Q9BXS1	227 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	SRA1	Q9HD15	236 aa	Known RBP	9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	ATP11B	Q9Y2G3	1177 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	TRANK1	O15050	2925 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	FRMPD3	Q5JV73	1810 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	DOCK2	Q92608	1830 aa		9.63	□□□□□ -0.87
NCOR1-223	ENST00000583226	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	POLR3D	P05423	398 aa	Predicted RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	RGS3	P49796	1198 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	HMGCS2	P54868	508 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	SNX17	Q15036	470 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	RALBP1	Q15311	655 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	SLC39A5	Q6ZMH5	540 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	CCDC84	Q86UT8	332 aa	Predicted RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	VGLL2	Q8N8G2	317 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	LRFN3	Q9BTN0	628 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	MRPL18	Q9H0U6	180 aa	Known RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	AKTIP	Q9H8T0	292 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	PRDM5	Q9NQX1	630 aa	Predicted RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	PDLIM7	Q9NR12	457 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	DDX20	Q9UHI6	824 aa	Known RBP	9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	RLF	Q13129	1914 aa		9.62	□□□□□ -0.87
NCOR1-223	ENST00000583226	UTY	O14607	1347 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	TRIM43B	A6NCK2	446 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	GRM8	O00222	908 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	FSCN2	O14926	492 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	NDUFB5	O43674	189 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	PDE8B	O95263	885 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	EDN3	P14138	238 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	HOXA7	P31268	230 aa	Predicted RBP	9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	IRX3	P78415	501 aa	Predicted RBP	9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	WDR43	Q15061	677 aa	Known RBP eCLIP	9.61	□□□□□ -0.87	4e-6	■□□□□ 9.3
NCOR1-223	ENST00000583226	NKAPL	Q5M9Q1	402 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	BEND3	Q5T5X7	828 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	MFSD14C	Q5VZR4	134 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	AGGF1	Q8N302	714 aa	eCLIP	9.61	□□□□□ -0.87	9e-19	■□□□□ 9.1
NCOR1-223	ENST00000583226	SLC7A3	Q8WY07	619 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	PPM1E	Q8WY54	764 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	TRIM43	Q96BQ3	446 aa	Predicted RBP	9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	TIFA	Q96CG3	184 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	ZKSCAN3	Q9BRR0	538 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	TXNRD2	Q9NNW7	524 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	LATS2	Q9NRM7	1088 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	RFX7	Q2KHR2	1363 aa		9.61	□□□□□ -0.87
NCOR1-223	ENST00000583226	DDTL	A6NHG4	134 aa	Predicted RBP	9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	DYRK3	O43781	588 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	CD68	P34810	354 aa	Predicted RBP	9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	METTL24	Q5JXM2	366 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	GPR142	Q7Z601	462 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	PLEKHH3	Q7Z736	793 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	ARRDC4	Q8NCT1	418 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	ASAP3	Q8TDY4	903 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	P2RX7	Q99572	595 aa	Known RBP	9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	OSBPL5	Q9H0X9	879 aa	Predicted RBP	9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	RBPJL	Q9UBG7	517 aa		9.6	□□□□□ -0.87
NCOR1-223	ENST00000583226	CACNA1F	O60840	1977 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	LDHB	P07195	334 aa	Known RBP	9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	IFIT1	P09914	478 aa	Known RBP	9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	PRDX5	P30044	214 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	ZEB1	P37275	1124 aa	Predicted RBP	9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	EPHB4	P54760	987 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	HERVK_113	P62684	666 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	ERVK-24	P63145	666 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	ARHGAP4	P98171	946 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	ECM1	Q16610	540 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	TWISTNB	Q3B726	338 aa	Predicted RBP	9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	TRIM60	Q495X7	471 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	TMEM31	Q5JXX7	168 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	CCAR1	Q8IX12	1150 aa	Known RBP	9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	MEGF10	Q96KG7	1140 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	NECAB3	Q96P71	396 aa	Predicted RBP	9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	ADAM19	Q9H013	955 aa		9.59	□□□□□ -0.87
NCOR1-223	ENST00000583226	PORCN	Q9H237	461 aa		9.59	□□□□□ -0.87

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