RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ANKS1AQ92625 1134 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 LMCD1Q9NZU5 365 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 MICAL3Q7RTP6 2002 aa18.84■□□□□ 0.61
SREBF1-221ENST00000583080 PPP1R11O60927 126 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-221ENST00000583080 PARP1P09874 1014 aaKnown RBP18.84■□□□□ 0.61
SREBF1-221ENST00000583080 HOXD8P13378 290 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-221ENST00000583080 HSD17B4P51659 736 aa18.84■□□□□ 0.61
SREBF1-221ENST00000583080 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-221ENST00000583080 LAMC2Q13753 1193 aa18.84■□□□□ 0.61
SREBF1-221ENST00000583080 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
SREBF1-221ENST00000583080 IL31RAQ8NI17 732 aa18.84■□□□□ 0.61
SREBF1-221ENST00000583080 UBE2ZQ9H832 354 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-221ENST00000583080 LGR5O75473 907 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 MYCLP12524 364 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-221ENST00000583080 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.6
SREBF1-221ENST00000583080 IKBKEQ14164 716 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 CCDC178Q5BJE1 867 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 CWC27Q6UX04 472 aaKnown RBP18.83■□□□□ 0.6
SREBF1-221ENST00000583080 STAG2Q8N3U4 1231 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 C17orf80Q9BSJ5 609 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 HCN4Q9Y3Q4 1203 aa18.83■□□□□ 0.6
SREBF1-221ENST00000583080 EFCAB14O75071 495 aa18.82■□□□□ 0.6
SREBF1-221ENST00000583080 HOXA13P31271 388 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-221ENST00000583080 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-221ENST00000583080 GHRHRQ02643 423 aa18.82■□□□□ 0.6
SREBF1-221ENST00000583080 HSDL1Q3SXM5 330 aa18.82■□□□□ 0.6
SREBF1-221ENST00000583080 MYSM1Q5VVJ2 828 aa18.82■□□□□ 0.6
SREBF1-221ENST00000583080 GPKOWQ92917 476 aaPredicted RBP eCLIP18.82■□□□□ 0.6
SREBF1-221ENST00000583080 ZFP91Q96JP5 570 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-221ENST00000583080 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
SREBF1-221ENST00000583080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-221ENST00000583080 GGPS1O95749 300 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 UBA1P22314 1058 aaKnown RBP18.81■□□□□ 0.6
SREBF1-221ENST00000583080 KCNA5P22460 613 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 THPOP40225 353 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 SP2Q02086 613 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 CELF3Q5SZQ8 465 aaKnown RBP18.81■□□□□ 0.6
SREBF1-221ENST00000583080 SERINC5Q86VE9 423 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 MYOCDQ8IZQ8 938 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 FBXO22Q8NEZ5 403 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 SPATA33Q96N06 139 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 AMNQ9BXJ7 453 aa18.81■□□□□ 0.6
SREBF1-221ENST00000583080 GPR37L1O60883 481 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 IL9P15248 144 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 NT5C2P49902 561 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 PGM5Q15124 567 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 SLC35G1Q2M3R5 365 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 LEXMQ3ZCV2 418 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 B4GALNT3Q6L9W6 998 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-221ENST00000583080 MTMR8Q96EF0 704 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 C16orf70Q9BSU1 422 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 OSBPL7Q9BZF2 842 aa18.8■□□□□ 0.6
SREBF1-221ENST00000583080 EMSYQ7Z589 1322 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 RSPH10B2B2RC85 870 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 PPFIA4O75335 1185 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 RSPH10BP0C881 870 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 HTRA4P83105 476 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-221ENST00000583080 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 PLEKHM2Q8IWE5 1019 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 SP7Q8TDD2 431 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-221ENST00000583080 UBAC1Q9BSL1 405 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 BCAS3Q9H6U6 928 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 DIAPH3Q9NSV4 1193 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 INSL6Q9Y581 213 aa18.79■□□□□ 0.6
SREBF1-221ENST00000583080 PI4K2BG5E9Z4 385 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 ZBTB5O15062 677 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 AMHP03971 560 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 HOXC8P31273 242 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 SEC23AQ15436 765 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
SREBF1-221ENST00000583080 PLEKHG4Q58EX7 1191 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 IFIT1BQ5T764 474 aaKnown RBP18.78■□□□□ 0.6
SREBF1-221ENST00000583080 VSIG10LQ86VR7 867 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 IL25Q9H293 177 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 MAD2L2Q9UI95 211 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 ARIH1Q9Y4X5 557 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-221ENST00000583080 PCDHA1Q9Y5I3 950 aa18.78■□□□□ 0.6
SREBF1-221ENST00000583080 C17orf102A2RUQ5 167 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 KLRF2D3W0D1 207 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 LGALS2P05162 132 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 CTSHP09668 335 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 SMIM10L2AP0DMW4 78 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 SMIM10L2BP0DMW5 78 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 HOMER1Q86YM7 354 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 ATP6V0A1Q93050 837 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 KRT23Q9C075 422 aa18.77■□□□□ 0.6
SREBF1-221ENST00000583080 COL4A6Q14031 1691 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 DOCK5Q9H7D0 1870 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 TREHO43280 583 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 EPC2Q52LR7 807 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 PTCRAQ6ISU1 281 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-221ENST00000583080 KCNV1Q6PIU1 500 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 CYB5R4Q7L1T6 521 aa18.76■□□□□ 0.59
SREBF1-221ENST00000583080 FCHSD1Q86WN1 690 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms