RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 TGFB3P10600 412 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 NAPAP54920 295 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 HSDL1Q3SXM5 330 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 FAM47CQ5HY64 1035 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 NFRKBQ6P4R8 1299 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 PPTC7Q8NI37 304 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 UPF3BQ9BZI7 483 aaKnown RBP21.52■■□□□ 1.04
LIMS2-218ENST00000582671 TM6SF1Q9BZW5 370 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 PCDHA6Q9UN73 950 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 PCDHA8Q9Y5H6 950 aa21.52■■□□□ 1.04
LIMS2-218ENST00000582671 CCDC196A0A1B0GTZ2 297 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 CSF2RAP15509 400 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 PDIA3P30101 505 aaKnown RBP21.51■■□□□ 1.03
LIMS2-218ENST00000582671 CHMP4BP1P59074 171 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 NTRK3Q16288 839 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 DGKDQ16760 1214 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 C16orf59Q7L2K0 433 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 SPATA33Q96N06 139 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 LARP6Q9BRS8 491 aaKnown RBP21.51■■□□□ 1.03
LIMS2-218ENST00000582671 NOC4LQ9BVI4 516 aaKnown RBP21.51■■□□□ 1.03
LIMS2-218ENST00000582671 HIPK3Q9H422 1215 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 BARHL2Q9NY43 387 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 CYP46A1Q9Y6A2 500 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 LAMA3Q16787 3333 aa21.51■■□□□ 1.03
LIMS2-218ENST00000582671 GBF1Q92538 1859 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 FIBPO43427 364 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 ZNF286BP0CG31 522 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 CYP2C9P11712 490 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 HOXD8P13378 290 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-218ENST00000582671 PKN1Q16512 942 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 PFKFB3Q16875 520 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-218ENST00000582671 GNPTABQ3T906 1256 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 PPP1R18Q6NYC8 613 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 WNT8AQ9H1J5 351 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 RIC8AQ9NPQ8 531 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 TELO2Q9Y4R8 837 aa21.5■■□□□ 1.03
LIMS2-218ENST00000582671 SZT2Q5T011 3432 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 SMCO2A6NFE2 343 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 SPDYE3A6NKU9 549 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 hCG_1984214I3L0E3 225 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 ADAMTS3O15072 1205 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 PPFIA3O75145 1194 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 ITGB5P18084 799 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
LIMS2-218ENST00000582671 PTPN11Q06124 597 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-218ENST00000582671 TMEM199Q8N511 208 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 ZNF713Q8N859 430 aaPredicted RBP21.49■■□□□ 1.03
LIMS2-218ENST00000582671 PHKBQ93100 1093 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 PGBD1Q96JS3 809 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.49■■□□□ 1.03
LIMS2-218ENST00000582671 MLXIPQ9HAP2 919 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 NCOA5Q9HCD5 579 aaKnown RBP21.49■■□□□ 1.03
LIMS2-218ENST00000582671 TMEM260Q9NX78 707 aa21.49■■□□□ 1.03
LIMS2-218ENST00000582671 HAS3O00219 553 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 PRPF3O43395 683 aaKnown RBP21.48■■□□□ 1.03
LIMS2-218ENST00000582671 PPFIA4O75335 1185 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 F2P00734 622 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 SUPT20HL2P0C7V6 817 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 ACRP10323 421 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 SCG2P13521 617 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 PSEN2P49810 448 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 ADCY7P51828 1080 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 CCL23P55773 120 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 CTAGE1Q96RT6 745 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 C16orf70Q9BSU1 422 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 UBIAD1Q9Y5Z9 338 aa21.48■■□□□ 1.03
LIMS2-218ENST00000582671 KAT6AQ92794 2004 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 ATP9AO75110 1047 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 CLK2P49760 499 aaKnown RBP21.47■■□□□ 1.03
LIMS2-218ENST00000582671 PPIGQ13427 754 aaKnown RBP eCLIP21.47■■□□□ 1.03
LIMS2-218ENST00000582671 GDF6Q6KF10 455 aaPredicted RBP21.47■■□□□ 1.03
LIMS2-218ENST00000582671 CYFIP1Q7L576 1253 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 NLRX1Q86UT6 975 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 SESTD1Q86VW0 696 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 ALG1Q9BT22 464 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 PDRG1Q9NUG6 133 aa21.47■■□□□ 1.03
LIMS2-218ENST00000582671 SEC24BO95487 1268 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 NEDD9Q14511 834 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 MFSD10Q14728 455 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 KIAA0753Q2KHM9 967 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 TMEM240Q5SV17 173 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 METTL7BQ6UX53 244 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 GPRASP2Q96D09 838 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 VWCEQ96DN2 955 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 SCLYQ96I15 445 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 RNPC3Q96LT9 517 aaKnown RBP21.46■■□□□ 1.03
LIMS2-218ENST00000582671 ANO3Q9BYT9 981 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 HDAC6Q9UBN7 1215 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 TET1Q8NFU7 2136 aa21.46■■□□□ 1.03
LIMS2-218ENST00000582671 IFNAR1P17181 557 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 HIC1Q14526 733 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 PTGISQ16647 500 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 GPR153Q6NV75 609 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 Q7L0L9 218 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 GPR20Q99678 358 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 SENP7Q9BQF6 1050 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 KATNAL1Q9BW62 490 aa21.45■■□□□ 1.02
LIMS2-218ENST00000582671 SLC26A6Q9BXS9 759 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms