RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ANKRD20A12PQ8NF67 263 aa10.43□□□□□ -0.74
SS18-220ENST00000582092 TMEM106CQ9BVX2 250 aa10.43□□□□□ -0.74
SS18-220ENST00000582092 TTC12Q9H892 705 aaPredicted RBP10.43□□□□□ -0.74
SS18-220ENST00000582092 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
SS18-220ENST00000582092 CCPG1Q9ULG6 757 aa10.43□□□□□ -0.74
SS18-220ENST00000582092 RABGAP1Q9Y3P9 1069 aa10.43□□□□□ -0.74
SS18-220ENST00000582092 DOCK3Q8IZD9 2030 aa10.43□□□□□ -0.74
SS18-220ENST00000582092 A0A087WWV3 80 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 SLC26A4O43511 780 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 FLOT1O75955 427 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 TDP2O95551 362 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 PRR29P0C7W0 189 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 CDC25AP30304 524 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
SS18-220ENST00000582092 ARHGAP4P98171 946 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 SEMA3FQ13275 785 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 MORC3Q14149 939 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 IL17AQ16552 155 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 NT5DC1Q5TFE4 455 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 SARM1Q6SZW1 724 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 MOXD1Q6UVY6 613 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 CCDC84Q86UT8 332 aaPredicted RBP10.42□□□□□ -0.74
SS18-220ENST00000582092 DHX40Q8IX18 779 aaKnown RBP10.42□□□□□ -0.74
SS18-220ENST00000582092 RAET1EQ8TD07 263 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 STAMQ92783 540 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 PLIN2Q99541 437 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 NT5C3AQ9H0P0 336 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 RANBP17Q9H2T7 1088 aaKnown RBP10.42□□□□□ -0.74
SS18-220ENST00000582092 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
SS18-220ENST00000582092 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
SS18-220ENST00000582092 ADGRA2Q96PE1 1338 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 KDM3AQ9Y4C1 1321 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 RPN1P04843 607 aaKnown RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 BCRP11274 1271 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 CDC25BP30305 580 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 HOXA7P31268 230 aaPredicted RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 HOXA13P31271 388 aaPredicted RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 CCT6AP40227 531 aaKnown RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 PPP1R2P41236 205 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 SARSP49591 514 aaKnown RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 RGS19P49795 217 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 DPYDQ12882 1025 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 FAM110CQ1W6H9 321 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 PRR16Q569H4 304 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 CPXCR1Q8N123 301 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 SAMD3Q8N6K7 520 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 SNX29Q8TEQ0 813 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 MRFAP1L1Q96HT8 127 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 FAM20AQ96MK3 541 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 MTMR9Q96QG7 549 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 BLZF1Q9H2G9 400 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 RPAP3Q9H6T3 665 aaPredicted RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 EXOC1Q9NV70 894 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.41□□□□□ -0.74
SS18-220ENST00000582092 SRRDQ9UH36 339 aa10.41□□□□□ -0.74
SS18-220ENST00000582092 MYPNQ86TC9 1320 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 CYP3A7-CYP3A51PA0A087WV96 503 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 A0A087X0B3 334 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 PP2D1A8MPX8 630 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 MEIS2O14770 477 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 TNPO2O14787 897 aaKnown RBP10.4□□□□□ -0.74
SS18-220ENST00000582092 TBX3O15119 743 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 ICAM1P05362 532 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 TPM2P07951 284 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 ALAS1P13196 640 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 PLCG1P19174 1290 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 CYP3A7P24462 503 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 SREBF1P36956 1147 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 ASIC1P78348 528 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 E2F4Q16254 413 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 FILIP1LQ4L180 1135 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 TREML2Q5T2D2 321 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 HAUS3Q68CZ6 603 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 SH3RF1Q7Z6J0 888 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 ANKRD13CQ8N6S4 541 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 IGSF22Q8N9C0 903 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 ENOX1Q8TC92 643 aaKnown RBP10.4□□□□□ -0.74
SS18-220ENST00000582092 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
SS18-220ENST00000582092 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
SS18-220ENST00000582092 SLC37A4O43826 429 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 SSBP05455 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
SS18-220ENST00000582092 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
SS18-220ENST00000582092 SOX10P56693 466 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 UBASH3AP57075 661 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 UBXN2AP68543 259 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 CCNA1P78396 465 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 FANCCQ00597 558 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 CUL4BQ13620 913 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 Q4G0T1 1027 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 KIAA1755Q5JYT7 1200 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 ZNF658Q5TYW1 1059 aaPredicted RBP10.39□□□□□ -0.75
SS18-220ENST00000582092 PLA2G4DQ86XP0 818 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 CREBRFQ8IUR6 639 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 C12orf42Q96LP6 360 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms