RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 FERMT2Q96AC1 680 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 MMP19Q99542 508 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 TEX13BQ9BXU2 312 aa14.26□□□□□ -0.13
SRSF1-204ENST00000581979 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
SRSF1-204ENST00000581979 KCTD2Q14681 263 aa14.25□□□□□ -0.13
SRSF1-204ENST00000581979 LETM2Q2VYF4 491 aa14.25□□□□□ -0.13
SRSF1-204ENST00000581979 ZNF792Q3KQV3 632 aa14.25□□□□□ -0.13
SRSF1-204ENST00000581979 RESP18Q5W5W9 173 aa14.25□□□□□ -0.13
SRSF1-204ENST00000581979 FMR1NBQ8N0W7 255 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-204ENST00000581979 FAM13BQ9NYF5 915 aa14.25□□□□□ -0.13
SRSF1-204ENST00000581979 NRBP1Q9UHY1 535 aa14.25□□□□□ -0.13
SRSF1-204ENST00000581979 DNM1LO00429 736 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 SEPT4O43236 478 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 CCNT1O60563 726 aaKnown RBP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 GRIN1Q05586 938 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 C7orf61Q8IZ16 206 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 SLC38A10Q9HBR0 1119 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 RIPK3Q9Y572 518 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 A0A1W2PPC1 479 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 ZBED4O75132 1171 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 PGK2P07205 417 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 TAL1P17542 331 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 SYKP43405 635 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 SPECC1Q5M775 1068 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 SNRNP48Q6IEG0 339 aaKnown RBP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 USP17L6PQ6QN14 398 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
SRSF1-204ENST00000581979 CTDP1Q9Y5B0 961 aaPredicted RBP14.24□□□□□ -0.13
SRSF1-204ENST00000581979 PLXNA1Q9UIW2 1896 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 DNAH12Q6ZR08 3092 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 ABCB11O95342 1321 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 CTAGE5O15320 804 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 ZNF202O95125 648 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 FDX1P10109 184 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 DEKP35659 375 aaKnown RBP14.23□□□□□ -0.13
SRSF1-204ENST00000581979 OAZ1P54368 228 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 AP3B2Q13367 1082 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 LRRC26Q2I0M4 334 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 ARL6IP4Q66PJ3 421 aaKnown RBP14.23□□□□□ -0.13
SRSF1-204ENST00000581979 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 GDF15Q99988 308 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 TSPY26PQ9H489 355 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 HPSEQ9Y251 543 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 MRPL11Q9Y3B7 192 aaKnown RBP14.23□□□□□ -0.13
SRSF1-204ENST00000581979 MYH7BA7E2Y1 1941 aa14.23□□□□□ -0.13
SRSF1-204ENST00000581979 DNAJC25-GNG10A0A024R161 153 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 FAM237AA0A1B0GTK4 181 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 FSD2A1L4K1 749 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 LAD1O00515 517 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 BMP8BP34820 402 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-204ENST00000581979 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
SRSF1-204ENST00000581979 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 MSL3Q8N5Y2 521 aaKnown RBP14.22□□□□□ -0.13
SRSF1-204ENST00000581979 ARRDC4Q8NCT1 418 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 KCNH3Q9ULD8 1083 aa14.22□□□□□ -0.13
SRSF1-204ENST00000581979 SPDYE3A6NKU9 549 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 MEIS2O14770 477 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 NEMFO60524 1076 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 ICAM1P05362 532 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 CPXCR1Q8N123 301 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 C4orf32Q8N8J7 132 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 SDF4Q9BRK5 362 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 ANO3Q9BYT9 981 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 SENP6Q9GZR1 1112 aaPredicted RBP14.21□□□□□ -0.13
SRSF1-204ENST00000581979 RAVER2Q9HCJ3 691 aaKnown RBP14.21□□□□□ -0.13
SRSF1-204ENST00000581979 CCPG1Q9ULG6 757 aa14.21□□□□□ -0.13
SRSF1-204ENST00000581979 ZMYND8Q9ULU4 1186 aaPredicted RBP14.21□□□□□ -0.13
SRSF1-204ENST00000581979 FOSP01100 380 aaPredicted RBP14.21□□□□□ -0.14
SRSF1-204ENST00000581979 MAMDC4Q6UXC1 1216 aa14.21□□□□□ -0.14
SRSF1-204ENST00000581979 DTHD1Q6ZMT9 781 aa14.21□□□□□ -0.14
SRSF1-204ENST00000581979 CHST13Q8NET6 341 aa14.21□□□□□ -0.14
SRSF1-204ENST00000581979 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.14
SRSF1-204ENST00000581979 TMEM60Q9H2L4 133 aa14.21□□□□□ -0.14
SRSF1-204ENST00000581979 FBXO40Q9UH90 709 aa14.21□□□□□ -0.14
SRSF1-204ENST00000581979 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 LAMA3Q16787 3333 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 SZT2Q5T011 3432 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 OPLAHO14841 1288 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 CFBP00751 764 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 OR52Z1P0C646 297 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 ZNF865P0CJ78 1059 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-204ENST00000581979 CCDC192P0DO97 292 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 GJC2Q5T442 439 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-204ENST00000581979 SASS6Q6UVJ0 657 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 RBM43Q6ZSC3 357 aaKnown RBP14.2□□□□□ -0.14
SRSF1-204ENST00000581979 ZNF467Q7Z7K2 595 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-204ENST00000581979 TEX2Q8IWB9 1127 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 SYMPKQ92797 1274 aaKnown RBP14.2□□□□□ -0.14
SRSF1-204ENST00000581979 AGBL1Q96MI9 1066 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 TIGD1Q96MW7 591 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 GRPEL1Q9HAV7 217 aa14.2□□□□□ -0.14
SRSF1-204ENST00000581979 ZNF536O15090 1300 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms