RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ITGB5P18084 799 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 TLE2Q04725 743 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 FAAP100Q0VG06 881 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 NPY5RQ15761 445 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 TRIM60Q495X7 471 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 BRDTQ58F21 947 aaPredicted RBP14.47□□□□□ -0.09
SNORD55-201ENST00000581525 CXCL17Q6UXB2 119 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 TRIM22Q8IYM9 498 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 C7orf61Q8IZ16 206 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 PPTC7Q8NI37 304 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 JADE2Q9NQC1 790 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 CEP290O15078 2479 aa14.47□□□□□ -0.09
SNORD55-201ENST00000581525 MROH7Q68CQ1 1323 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 MEIS1O00470 390 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 CPLX1O14810 134 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 KIAA0355O15063 1070 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 EDIL3O43854 480 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 CDKL5O76039 1030 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
SNORD55-201ENST00000581525 MMP3P08254 477 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.09
SNORD55-201ENST00000581525 STK3Q13188 491 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 ITGA7Q13683 1181 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 NEDD9Q14511 834 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 GALNT17Q6IS24 598 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 NIPA1Q7RTP0 329 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 DHX37Q8IY37 1157 aaKnown RBP14.46□□□□□ -0.09
SNORD55-201ENST00000581525 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 CCDC148Q8NFR7 591 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 BICD2Q8TD16 824 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 AFG1LQ8WV93 481 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 GTF3C6Q969F1 213 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 CDHR1Q96JP9 859 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 MXRA8Q9BRK3 442 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 MTG1Q9BT17 334 aaPredicted RBP14.46□□□□□ -0.09
SNORD55-201ENST00000581525 ANO3Q9BYT9 981 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 EHMT1Q9H9B1 1298 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 PDLIM7Q9NR12 457 aa14.46□□□□□ -0.09
SNORD55-201ENST00000581525 TRIM43BA6NCK2 446 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 HAS3O00219 553 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 LARGE1O95461 756 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 FDPSP14324 419 aaKnown RBP14.45□□□□□ -0.1
SNORD55-201ENST00000581525 CIITAP33076 1130 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 PTPN11Q06124 597 aaPredicted RBP14.45□□□□□ -0.1
SNORD55-201ENST00000581525 METTL7BQ6UX53 244 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 NLRX1Q86UT6 975 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 SESTD1Q86VW0 696 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 FAM126BQ8IXS8 530 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 GIMAP8Q8ND71 665 aaPredicted RBP14.45□□□□□ -0.1
SNORD55-201ENST00000581525 KAT2BQ92831 832 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 TRIM43Q96BQ3 446 aaPredicted RBP14.45□□□□□ -0.1
SNORD55-201ENST00000581525 BCAS3Q9H6U6 928 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 RTEL1Q9NZ71 1219 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 LIMCH1Q9UPQ0 1083 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 ATP11BQ9Y2G3 1177 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
SNORD55-201ENST00000581525 SCN10AQ9Y5Y9 1956 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 DCDC2CA8MYV0 355 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 ATP9AO75110 1047 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 GGPS1O95749 300 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 KCNA2P16389 499 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 ST3GAL1Q11201 340 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 DGKDQ16760 1214 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 CEP55Q53EZ4 464 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 NFRKBQ6P4R8 1299 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
SNORD55-201ENST00000581525 ZSCAN31Q96LW9 406 aaPredicted RBP14.44□□□□□ -0.1
SNORD55-201ENST00000581525 TBC1D32Q96NH3 1257 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 BACH2Q9BYV9 841 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 TMEM260Q9NX78 707 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 VPS54Q9P1Q0 977 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 TBX21Q9UL17 535 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 PCDHA4Q9UN74 947 aa14.44□□□□□ -0.1
SNORD55-201ENST00000581525 IGLV3-22A0A075B6J6 115 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 A0A1W2PPC1 479 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 PPFIA3O75145 1194 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 F2P00734 622 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 CLTBP09497 229 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 USP11P51784 963 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 ARHGAP4P98171 946 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 RABEP1Q15276 862 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 NBPF20Q3BBV1 942 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 SH3RF1Q7Z6J0 888 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 REXO1Q8N1G1 1221 aaKnown RBP14.43□□□□□ -0.1
SNORD55-201ENST00000581525 NSUN7Q8NE18 718 aaKnown RBP14.43□□□□□ -0.1
SNORD55-201ENST00000581525 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 PHF20Q9BVI0 1012 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 KCNH7Q9NS40 1196 aa14.43□□□□□ -0.1
SNORD55-201ENST00000581525 ZMYND8Q9ULU4 1186 aaPredicted RBP14.43□□□□□ -0.1
SNORD55-201ENST00000581525 NFASCO94856 1347 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 MYL3P08590 195 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 ITGB8P26012 769 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 MTMR1Q13613 665 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 CYFIP1Q7L576 1253 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 CYP2W1Q8TAV3 490 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 VTI1AQ96AJ9 217 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 SPATA33Q96N06 139 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms