RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 YIPF4Q9BSR8 244 aa6.27□□□□□ -1.41
TTC39C-207ENST00000581394 PCED1AQ9H1Q7 454 aa6.27□□□□□ -1.41
TTC39C-207ENST00000581394 NKX2-4Q9H2Z4 354 aa6.27□□□□□ -1.41
TTC39C-207ENST00000581394 SEMA4AQ9H3S1 761 aa6.27□□□□□ -1.41
TTC39C-207ENST00000581394 SELENOPP49908 381 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 MLLT6P55198 1093 aaPredicted RBP6.26□□□□□ -1.41
TTC39C-207ENST00000581394 R3HDM1Q15032 1099 aaKnown RBP6.26□□□□□ -1.41
TTC39C-207ENST00000581394 PPP2R5EQ16537 467 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 SLFN13Q68D06 897 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 CEP68Q76N32 757 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 TOE1Q96GM8 510 aaKnown RBP6.26□□□□□ -1.41
TTC39C-207ENST00000581394 SHDQ96IW2 340 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 CLIC6Q96NY7 704 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 WRNIP1Q96S55 665 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 DEF6Q9H4E7 631 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 DTLQ9NZJ0 730 aa6.26□□□□□ -1.41
TTC39C-207ENST00000581394 PATE3B3GLJ2 98 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 CHRNA2Q15822 529 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 ZNF585AQ6P3V2 769 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 KBTBD2Q8IY47 623 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 KLHL36Q8N4N3 616 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 ZCCHC14Q8WYQ9 949 aaKnown RBP6.25□□□□□ -1.41
TTC39C-207ENST00000581394 GPRASP2Q96D09 838 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 TRMT2BQ96GJ1 504 aaKnown RBP6.25□□□□□ -1.41
TTC39C-207ENST00000581394 ZSWIM3Q96MP5 696 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 WWC2-AS2Q96NR7 200 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 TMEM209Q96SK2 561 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 TCAF1Q9Y4C2 921 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 TESMINQ9Y4I5 508 aa6.25□□□□□ -1.41
TTC39C-207ENST00000581394 HGSO14964 777 aaPredicted RBP6.24□□□□□ -1.41
TTC39C-207ENST00000581394 AMHP03971 560 aa6.24□□□□□ -1.41
TTC39C-207ENST00000581394 TESK1Q15569 626 aa6.24□□□□□ -1.41
TTC39C-207ENST00000581394 EMC4Q5J8M3 183 aa6.24□□□□□ -1.41
TTC39C-207ENST00000581394 CCDC103Q8IW40 242 aa6.24□□□□□ -1.41
TTC39C-207ENST00000581394 DIO2Q92813 273 aa6.24□□□□□ -1.41
TTC39C-207ENST00000581394 COA3Q9Y2R0 106 aaPredicted RBP6.24□□□□□ -1.41
TTC39C-207ENST00000581394 TCRBV5S2A0A599 114 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 MUSKO15146 869 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 MYO1BO43795 1136 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 TADA3O75528 432 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 BCL6P41182 706 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 KCNAB2Q13303 367 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 ARRDC4Q8NCT1 418 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 TMEM169Q96HH4 297 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 JADE2Q9NQC1 790 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 FTSJ1Q9UET6 329 aa6.23□□□□□ -1.41
TTC39C-207ENST00000581394 TMEFF2Q9UIK5 374 aaPredicted RBP6.23□□□□□ -1.41
TTC39C-207ENST00000581394 H7BY64 318 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 ARNTLO00327 626 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 ZNF623O75123 536 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 LRG1P02750 347 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 NFATC3Q12968 1075 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 ACBD5Q5T8D3 534 aaPredicted RBP6.22□□□□□ -1.41
TTC39C-207ENST00000581394 MEGF9Q9H1U4 602 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 CROTQ9UKG9 612 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 PCDHB4Q9Y5E5 795 aa6.22□□□□□ -1.41
TTC39C-207ENST00000581394 B4GALT4O60513 344 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 SCG5P05408 212 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 HOXC12P31275 282 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 GJA8P48165 433 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 NCAPHQ15003 741 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 CRB2Q5IJ48 1285 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 STEAP3Q658P3 488 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 BTN2A2Q8WVV5 523 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 PTPN18Q99952 460 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 BARX1Q9HBU1 254 aaPredicted RBP6.21□□□□□ -1.42
TTC39C-207ENST00000581394 FBXL7Q9UJT9 491 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 WASF3Q9UPY6 502 aa6.21□□□□□ -1.42
TTC39C-207ENST00000581394 MEFVO15553 781 aaPredicted RBP6.2□□□□□ -1.42
TTC39C-207ENST00000581394 COL6A1P12109 1028 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 NASPP49321 788 aaPredicted RBP6.2□□□□□ -1.42
TTC39C-207ENST00000581394 KLF10Q13118 480 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 SPDYAQ5MJ70 313 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 METTL16Q86W50 562 aaKnown RBP6.2□□□□□ -1.42
TTC39C-207ENST00000581394 FAM169BQ8N8A8 192 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 KREMEN2Q8NCW0 462 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 RCBTB1Q8NDN9 531 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 Q8TCH9 128 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 LGR4Q9BXB1 951 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 ADAM29Q9UKF5 820 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 HS3ST3A1Q9Y663 406 aa6.2□□□□□ -1.42
TTC39C-207ENST00000581394 SCAMP3O14828 347 aaKnown RBP6.19□□□□□ -1.42
TTC39C-207ENST00000581394 RECKO95980 971 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 KRTAP1-1Q07627 177 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 LSAMPQ13449 338 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 TRMT10BQ6PF06 316 aaKnown RBP6.19□□□□□ -1.42
TTC39C-207ENST00000581394 PHOSPHO1Q8TCT1 267 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 CPLX3Q8WVH0 158 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 ZDHHC9Q9Y397 364 aa6.19□□□□□ -1.42
TTC39C-207ENST00000581394 CPP00450 1065 aa6.18□□□□□ -1.42
TTC39C-207ENST00000581394 SNRPB2P08579 225 aaKnown RBP6.18□□□□□ -1.42
TTC39C-207ENST00000581394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.18□□□□□ -1.42
TTC39C-207ENST00000581394 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
TTC39C-207ENST00000581394 SMOC1Q9H4F8 434 aa6.18□□□□□ -1.42
TTC39C-207ENST00000581394 SEC61A2Q9H9S3 476 aa6.18□□□□□ -1.42
TTC39C-207ENST00000581394 MYOTQ9UBF9 498 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms