RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 STXBP2Q15833 593 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 BMP8AQ7Z5Y6 402 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 RPAINQ86UA6 219 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
IFT20-211ENST00000580991 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
IFT20-211ENST00000580991 TOP1MTQ969P6 601 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 PRRX2Q99811 253 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
IFT20-211ENST00000580991 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 PDHBP11177 359 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 THPOP40225 353 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 ZNF200P98182 395 aaPredicted RBP17.23■□□□□ 0.35
IFT20-211ENST00000580991 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 PKN1Q16512 942 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 RNF135Q8IUD6 432 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 PRSS33Q8NF86 280 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 PPTC7Q8NI37 304 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 EDAQ92838 391 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 IWS1Q96ST2 819 aa17.23■□□□□ 0.35
IFT20-211ENST00000580991 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
IFT20-211ENST00000580991 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 MBTPS2O43462 519 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 UPP2O95045 317 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 FGRP09769 529 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 USH1GQ495M9 461 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 SERINC5Q86VE9 423 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 SEPT8Q92599 483 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
IFT20-211ENST00000580991 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 RBAK-RBAKDNI3L0D1 243 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 FOXP2O15409 715 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 CLUL1Q15846 466 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 TAAR1Q96RJ0 339 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 LMAN2LQ9H0V9 348 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 MRVI1Q9Y6F6 885 aa17.21■□□□□ 0.35
IFT20-211ENST00000580991 RIF1Q5UIP0 2472 aaKnown RBP17.21■□□□□ 0.34
IFT20-211ENST00000580991 CACNA1AO00555 2505 aa17.2■□□□□ 0.34
IFT20-211ENST00000580991 PPFIA4O75335 1185 aa17.2■□□□□ 0.34
IFT20-211ENST00000580991 EIF3JO75822 258 aaKnown RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 SNHG28P0DPA3 235 aa17.2■□□□□ 0.34
IFT20-211ENST00000580991 HOXD8P13378 290 aaPredicted RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
IFT20-211ENST00000580991 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 IER5LQ5T953 404 aa17.2■□□□□ 0.34
IFT20-211ENST00000580991 SYTL5Q8TDW5 730 aaPredicted RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 PBXIP1Q96AQ6 731 aa17.2■□□□□ 0.34
IFT20-211ENST00000580991 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
IFT20-211ENST00000580991 C5orf67F2Z3F1 127 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 STXBP3O00186 592 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 RB1P06400 928 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 HYAL1Q12794 435 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 HIC1Q14526 733 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
IFT20-211ENST00000580991 GPATCH4Q5T3I0 446 aaKnown RBP17.19■□□□□ 0.34
IFT20-211ENST00000580991 TRIM67Q6ZTA4 783 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 MCF2L2Q86YR7 1114 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
IFT20-211ENST00000580991 FIBCD1Q8N539 461 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 TBC1D5Q92609 795 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 TTC14Q96N46 770 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 C11orf84Q9BUA3 381 aaPredicted RBP17.19■□□□□ 0.34
IFT20-211ENST00000580991 COL20A1Q9P218 1284 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 ATG2AQ2TAZ0 1938 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 ABCB11O95342 1321 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
IFT20-211ENST00000580991 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.18■□□□□ 0.34
IFT20-211ENST00000580991 TMEM221A6NGB7 291 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 M0R296 226 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 CTNNB1P35222 781 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 FOXK2Q01167 660 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 IL17RAQ96F46 866 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 CD207Q9UJ71 328 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 RWDD3Q9Y3V2 267 aa17.18■□□□□ 0.34
IFT20-211ENST00000580991 C17orf102A2RUQ5 167 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 CAND2O75155 1236 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 TBX10O75333 385 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 NEFLP07196 543 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 BMPR1AP36894 532 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 TCF15Q12870 199 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 MYSM1Q5VVJ2 828 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 APBB2Q92870 758 aa17.17■□□□□ 0.34
IFT20-211ENST00000580991 GRM6O15303 877 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 GFRA3O60609 400 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 NR3C2P08235 984 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 EIF2AK2P19525 551 aaKnown RBP17.16■□□□□ 0.34
IFT20-211ENST00000580991 ALX1Q15699 326 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
IFT20-211ENST00000580991 HSDL1Q3SXM5 330 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms