RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 V9GYY5 206 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SERPINC1P01008 464 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PRPHP41219 470 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MYL5Q02045 173 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 NCAPHQ15003 741 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RNF207Q6ZRF8 634 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TMC6Q7Z403 805 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 C2orf69Q8N8R5 385 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 BLZF1Q9H2G9 400 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PCDHA12Q9UN75 941 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MORC2Q9Y6X9 1032 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MYH7BA7E2Y1 1941 aa14.24□□□□□ -0.13
CDK5RAP3-217ENST00000580287 LAD1O00515 517 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TRAF1Q13077 416 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 LBX2Q6XYB7 198 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 IGSF22Q8N9C0 903 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 LRWD1Q9UFC0 647 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 AGTPBP1Q9UPW5 1226 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MSH4O15457 936 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ARP10275 920 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 HERVK_113P62684 666 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CCZ1BP86790 482 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CCZ1P86791 482 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 E2F4Q16254 413 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ECM1Q16610 540 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 NAALADL2Q58DX5 795 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PAGE5Q96GU1 130 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GTPBP4Q9BZE4 634 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MAN1B1Q9UKM7 699 aa14.23□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RLFQ13129 1914 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 IGLV3-22A0A075B6J6 115 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CYP3A7-CYP3A51PA0A087WV96 503 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MYCLP12524 364 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CYP3A7P24462 503 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 HOXA7P31268 230 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 FANCCQ00597 558 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CABP7Q86V35 215 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PDCL2Q8N4E4 241 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ETNPPLQ8TBG4 499 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CCDC34Q96HJ3 373 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MS4A4AQ96JQ5 239 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RMDN3Q96TC7 470 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 KCNMB3Q9NPA1 279 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PAPPA2Q9BXP8 1791 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 IKBKBO14920 756 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ITGB5P18084 799 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 PLCG1P19174 1290 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 BMP6P22004 513 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 HUNKP57058 714 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 KANK3Q6NY19 840 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MCF2L2Q86YR7 1114 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 WDR11Q9BZH6 1224 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 HSD3B7Q9H2F3 369 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 DISC1Q9NRI5 854 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 FANCLQ9NW38 375 aa14.22□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 SLFN14P0C7P3 912 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 GCFC2P16383 781 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MRPS9P82933 396 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CNTN2Q02246 1040 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 FSTL1Q12841 308 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 NCAPG2Q86XI2 1143 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 TRMT44Q8IYL2 757 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 ANKRD7Q92527 254 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 MBOAT7Q96N66 472 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 RBPJLQ9UBG7 517 aa14.21□□□□□ -0.13
CDK5RAP3-217ENST00000580287 CCL15-CCL14A0A0B4J2E2 113 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CNMDO75829 334 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CIITAP33076 1130 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 STAT6P42226 847 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 UBASH3AP57075 661 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CCL15Q16663 113 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CEP55Q53EZ4 464 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 RRAGBQ5VZM2 374 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 ARMCX5Q6P1M9 558 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 PDXDC2PQ6P474 469 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 IQUBQ8NA54 791 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 BRI3BPQ8WY22 251 aa14.21□□□□□ -0.14
CDK5RAP3-217ENST00000580287 BTBD19C9JJ37 291 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CHMP2AO43633 222 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CYP3A4P08684 503 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 FDX1P10109 184 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CUL4BQ13620 913 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 KCNK18Q7Z418 384 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CYP39A1Q9NYL5 469 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 TXLNAP40222 546 aa14.2□□□□□ -0.14
CDK5RAP3-217ENST00000580287 TMEM266Q2M3C6 531 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms