RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 PPTC7Q8NI37 304 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 PHKBQ93100 1093 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 NCOA5Q9HCD5 579 aaKnown RBP12.49□□□□□ -0.41
NDEL1-208ENST00000580237 RIC8AQ9NPQ8 531 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
NDEL1-208ENST00000580237 TBX21Q9UL17 535 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
NDEL1-208ENST00000580237 SMCO2A6NFE2 343 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 B4GALT4O60513 344 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 TGFB3P10600 412 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 CDK7P50613 346 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 SP4Q02446 784 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 NEDD9Q14511 834 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-208ENST00000580237 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 C6orf50Q9HD87 102 aa12.48□□□□□ -0.41
NDEL1-208ENST00000580237 SCN5AQ14524 2016 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 GRIN2DO15399 1336 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 PRPF3O43395 683 aaKnown RBP12.47□□□□□ -0.41
NDEL1-208ENST00000580237 TIMP1P01033 207 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 FOSP01100 380 aaPredicted RBP12.47□□□□□ -0.41
NDEL1-208ENST00000580237 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 AP3B2Q13367 1082 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 MTMR1Q13613 665 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 NFRKBQ6P4R8 1299 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 TEX2Q8IWB9 1127 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
NDEL1-208ENST00000580237 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 SLC43A3Q8NBI5 491 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 PPP1R13LQ8WUF5 828 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 TRPV6Q9H1D0 765 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 TRMT13Q9NUP7 481 aaKnown RBP12.47□□□□□ -0.41
NDEL1-208ENST00000580237 PKD2L1Q9P0L9 805 aa12.47□□□□□ -0.41
NDEL1-208ENST00000580237 CDKL5O76039 1030 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 CD4P01730 458 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 IFNAR1P17181 557 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 ITGB8P26012 769 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 GNA11P29992 359 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 ICAM3P32942 547 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 ZNF76P36508 570 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 EVCP57679 992 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 SSRP1Q08945 709 aaKnown RBP12.46□□□□□ -0.41
NDEL1-208ENST00000580237 PPIGQ13427 754 aaKnown RBP eCLIP12.46□□□□□ -0.413e-7■□□□□ 10.3
NDEL1-208ENST00000580237 MFSD10Q14728 455 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 METTL7BQ6UX53 244 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 CYFIP1Q7L576 1253 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 C7orf31Q8N865 590 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 GIMAP8Q8ND71 665 aaPredicted RBP12.46□□□□□ -0.41
NDEL1-208ENST00000580237 GPRASP2Q96D09 838 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.41
NDEL1-208ENST00000580237 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
NDEL1-208ENST00000580237 ALG1Q9BT22 464 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 SLKQ9H2G2 1235 aaPredicted RBP12.46□□□□□ -0.41
NDEL1-208ENST00000580237 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
NDEL1-208ENST00000580237 MYH9P35579 1960 aaKnown RBP12.46□□□□□ -0.41
NDEL1-208ENST00000580237 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 F2P00734 622 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 CYP2C9P11712 490 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 CYP2C18P33260 490 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 PSEN2P49810 448 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 SP2Q02086 613 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 PTPN11Q06124 597 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-208ENST00000580237 KIAA0753Q2KHM9 967 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 HSDL1Q3SXM5 330 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 MFSD5Q6N075 450 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 NOC4LQ9BVI4 516 aaKnown RBP12.45□□□□□ -0.42
NDEL1-208ENST00000580237 VPS54Q9P1Q0 977 aa12.45□□□□□ -0.42
NDEL1-208ENST00000580237 ZNF215Q9UL58 517 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-208ENST00000580237 PPFIA4O75335 1185 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 DEXIO95424 95 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 LGALS2P05162 132 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 CSF2RAP15509 400 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 ITGB5P18084 799 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 SREBF1P36956 1147 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 AK2P54819 239 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 CCL23P55773 120 aa12.44□□□□□ -0.42
NDEL1-208ENST00000580237 NLRP5P59047 1200 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms