RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 DBF4BQ8NFT6 615 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 DNERQ8NFT8 737 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 ESYT1Q9BSJ8 1104 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 ALG1Q9BT22 464 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 NAPBQ9H115 298 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 IL25Q9H293 177 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 PRKAG3Q9UGI9 489 aa22.61■■□□□ 1.21
LIMD2-209ENST00000580222 H3BNC9 293 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 EFCAB14O75071 495 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 LGR5O75473 907 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 SLC3A2P08195 630 aaKnown RBP22.6■■□□□ 1.21
LIMD2-209ENST00000580222 PSEN2P49810 448 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 DLX2Q07687 328 aaPredicted RBP22.6■■□□□ 1.21
LIMD2-209ENST00000580222 PTK7Q13308 1070 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 GPM6BQ13491 265 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 SEPT14Q6ZU15 432 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 NACAP1Q9BZK3 213 aa22.6■■□□□ 1.21
LIMD2-209ENST00000580222 SIP14410 1827 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 GH1P01241 217 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 CLUL1Q15846 466 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 PTPROQ16827 1216 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 TIGD5Q53EQ6 642 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 VPS53Q5VIR6 699 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 C7orf31Q8N865 590 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 MFSD14AQ96MC6 490 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 CLDND1Q9NY35 253 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 CTNNA3Q9UI47 895 aa22.59■■□□□ 1.21
LIMD2-209ENST00000580222 HAS3O00219 553 aa22.58■■□□□ 1.21
LIMD2-209ENST00000580222 RANBP6O60518 1105 aaKnown RBP22.58■■□□□ 1.21
LIMD2-209ENST00000580222 CASTP20810 708 aaKnown RBP22.58■■□□□ 1.21
LIMD2-209ENST00000580222 TAAR1Q96RJ0 339 aa22.58■■□□□ 1.21
LIMD2-209ENST00000580222 TMEM47Q9BQJ4 181 aa22.58■■□□□ 1.21
LIMD2-209ENST00000580222 COL20A1Q9P218 1284 aa22.58■■□□□ 1.21
LIMD2-209ENST00000580222 ZFHX2Q9C0A1 2572 aaPredicted RBP22.58■■□□□ 1.21
LIMD2-209ENST00000580222 ZNF286BP0CG31 522 aa22.57■■□□□ 1.2
LIMD2-209ENST00000580222 HSPD1P10809 573 aaKnown RBP22.57■■□□□ 1.2
LIMD2-209ENST00000580222 HERC4Q5GLZ8 1057 aaPredicted RBP22.57■■□□□ 1.2
LIMD2-209ENST00000580222 PPP4R3BQ5MIZ7 849 aa22.57■■□□□ 1.2
LIMD2-209ENST00000580222 RNF135Q8IUD6 432 aa22.57■■□□□ 1.2
LIMD2-209ENST00000580222 TMEM192Q8IY95 271 aa22.57■■□□□ 1.2
LIMD2-209ENST00000580222 NSUN3Q9H649 340 aaKnown RBP22.57■■□□□ 1.2
LIMD2-209ENST00000580222 AMHP03971 560 aa22.56■■□□□ 1.2
LIMD2-209ENST00000580222 MFSD10Q14728 455 aa22.56■■□□□ 1.2
LIMD2-209ENST00000580222 SMAD2Q15796 467 aaKnown RBP22.56■■□□□ 1.2
LIMD2-209ENST00000580222 KIAA0753Q2KHM9 967 aa22.56■■□□□ 1.2
LIMD2-209ENST00000580222 CTC1Q2NKJ3 1217 aa22.56■■□□□ 1.2
LIMD2-209ENST00000580222 RPAINQ86UA6 219 aa22.56■■□□□ 1.2
LIMD2-209ENST00000580222 CPVLQ9H3G5 476 aa22.56■■□□□ 1.2
LIMD2-209ENST00000580222 TECTAO75443 2155 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 F2P00734 622 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 PDHBP11177 359 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 DGKDQ16760 1214 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 PLEKHG4Q58EX7 1191 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 FBXO11Q86XK2 927 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 DSCC1Q9BVC3 393 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 UPF3BQ9BZI7 483 aaKnown RBP22.55■■□□□ 1.2
LIMD2-209ENST00000580222 ALG13Q9NP73 1137 aaKnown RBP22.55■■□□□ 1.2
LIMD2-209ENST00000580222 DDX41Q9UJV9 622 aaKnown RBP22.55■■□□□ 1.2
LIMD2-209ENST00000580222 MYO7AQ13402 2215 aa22.55■■□□□ 1.2
LIMD2-209ENST00000580222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.54■■□□□ 1.2
LIMD2-209ENST00000580222 MBTPS2O43462 519 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 UPP2O95045 317 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 TOP1P11387 765 aaKnown RBP22.54■■□□□ 1.2
LIMD2-209ENST00000580222 GTF2F1P35269 517 aaKnown RBP eCLIP22.54■■□□□ 1.2
LIMD2-209ENST00000580222 HYAL1Q12794 435 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 TCF15Q12870 199 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 USH1GQ495M9 461 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 SYTL5Q8TDW5 730 aaPredicted RBP22.54■■□□□ 1.2
LIMD2-209ENST00000580222 TOP1MTQ969P6 601 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 SAMD11Q96NU1 681 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 MPHOSPH6Q99547 160 aaKnown RBP22.54■■□□□ 1.2
LIMD2-209ENST00000580222 ANO2Q9NQ90 1003 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 FAM50BQ9Y247 325 aa22.54■■□□□ 1.2
LIMD2-209ENST00000580222 RSPH10B2B2RC85 870 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 FGRP09769 529 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 RSPH10BP0C881 870 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 THPOP40225 353 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 ZNF543Q08ER8 600 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 RGS22Q8NE09 1264 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 EDAQ92838 391 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 YME1L1Q96TA2 773 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 ANAPC4Q9UJX5 808 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 ZMYM6O95789 1325 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 WDR19Q8NEZ3 1342 aa22.53■■□□□ 1.2
LIMD2-209ENST00000580222 ORC4O43929 436 aa22.52■■□□□ 1.2
LIMD2-209ENST00000580222 ST18O60284 1047 aa22.52■■□□□ 1.2
LIMD2-209ENST00000580222 SORBS3O60504 671 aa22.52■■□□□ 1.2
LIMD2-209ENST00000580222 LINC00271P0C7V0 271 aa22.52■■□□□ 1.2
LIMD2-209ENST00000580222 SERINC5Q86VE9 423 aa22.52■■□□□ 1.2
LIMD2-209ENST00000580222 GRM6O15303 877 aa22.51■■□□□ 1.19
LIMD2-209ENST00000580222 LINC01565O15544 149 aa22.51■■□□□ 1.19
LIMD2-209ENST00000580222 PTH1RQ03431 593 aa22.51■■□□□ 1.19
LIMD2-209ENST00000580222 ALX1Q15699 326 aa22.51■■□□□ 1.19
LIMD2-209ENST00000580222 EMID1Q96A84 441 aaPredicted RBP22.51■■□□□ 1.19
LIMD2-209ENST00000580222 LAMA4Q16363 1823 aa22.51■■□□□ 1.19
LIMD2-209ENST00000580222 B4DLN1 442 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 TBX10O75333 385 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 FGAP02671 866 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 GOLGA8HP0CJ92 632 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 SNHG28P0DPA3 235 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms