RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 PBX4Q9BYU1 374 aa27.37■■□□□ 1.97
CDKN2A-214ENST00000579755 BACH2Q9BYV9 841 aa27.37■■□□□ 1.97
CDKN2A-214ENST00000579755 CXXC1Q9P0U4 656 aaPredicted RBP27.37■■□□□ 1.97
CDKN2A-214ENST00000579755 PITPNM1O00562 1244 aa27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 EPB41L2O43491 1005 aaKnown RBP27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 FOSL2P15408 326 aa27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 RFC2P35250 354 aa27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 PSEN2P49810 448 aa27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 KAT2BQ92831 832 aa27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 FTOQ9C0B1 505 aaKnown RBP eCLIP27.36■■□□□ 1.97
CDKN2A-214ENST00000579755 PBX2P40425 430 aa27.35■■□□□ 1.97
CDKN2A-214ENST00000579755 MFSD10Q14728 455 aa27.35■■□□□ 1.97
CDKN2A-214ENST00000579755 USP17L6PQ6QN14 398 aa27.35■■□□□ 1.97
CDKN2A-214ENST00000579755 SESTD1Q86VW0 696 aa27.35■■□□□ 1.97
CDKN2A-214ENST00000579755 MICU3Q86XE3 530 aa27.35■■□□□ 1.97
CDKN2A-214ENST00000579755 RTEL1Q9NZ71 1219 aa27.35■■□□□ 1.97
CDKN2A-214ENST00000579755 IQCF3P0C7M6 154 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 ZNF286BP0CG31 522 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 KRT32Q14532 448 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 KIAA0753Q2KHM9 967 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 GDF6Q6KF10 455 aaPredicted RBP27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 CAGE1Q8TC20 777 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 PSTPIP2Q9H939 334 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 HDAC6Q9UBN7 1215 aa27.34■■□□□ 1.97
CDKN2A-214ENST00000579755 NOP56O00567 594 aaKnown RBP27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 UBA1P22314 1058 aaKnown RBP27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 SP2Q02086 613 aa27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 NEDD9Q14511 834 aa27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 GRIN2CQ14957 1233 aa27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 DHX32Q7L7V1 743 aaKnown RBP27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 SGMS1Q86VZ5 419 aa27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 MAFAQ8NHW3 353 aaPredicted RBP27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 GTF2IRD1Q9UHL9 959 aa27.33■■□□□ 1.97
CDKN2A-214ENST00000579755 PIK3CDO00329 1044 aa27.32■■□□□ 1.96
CDKN2A-214ENST00000579755 FGD1P98174 961 aa27.32■■□□□ 1.96
CDKN2A-214ENST00000579755 COL9A3Q14050 684 aaPredicted RBP27.32■■□□□ 1.96
CDKN2A-214ENST00000579755 HSDL1Q3SXM5 330 aa27.32■■□□□ 1.96
CDKN2A-214ENST00000579755 SLC28A3Q9HAS3 691 aa27.32■■□□□ 1.96
CDKN2A-214ENST00000579755 FIBPO43427 364 aa27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 F2P00734 622 aa27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 MRPS9P82933 396 aaKnown RBP27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 XRRA1Q6P2D8 792 aa27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 TMTC3Q6ZXV5 915 aa27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 NLRX1Q86UT6 975 aa27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 AFAP1L1Q8TED9 768 aa27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 GPKOWQ92917 476 aaPredicted RBP eCLIP27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 RBM28Q9NW13 759 aaKnown RBP27.31■■□□□ 1.96
CDKN2A-214ENST00000579755 hCG_1642624A0A1W2PR95 340 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 DLL1O00548 723 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 MEIS2O14770 477 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 HMGB1P09429 215 aaKnown RBP27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 ATP2A2P16615 1042 aaKnown RBP27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 TSGA10IPQ3SY00 556 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 PCNX4Q63HM2 1172 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 HEATR3Q7Z4Q2 680 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 INPP4AQ96PE3 977 aaPredicted RBP27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 UPF2Q9HAU5 1272 aaKnown RBP27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 NAP1L2Q9ULW6 460 aaPredicted RBP27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 FRMPD4Q14CM0 1322 aa27.3■■□□□ 1.96
CDKN2A-214ENST00000579755 SPATA31C2B4DYI2 1134 aa27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 HAS3O00219 553 aa27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 HOXD8P13378 290 aaPredicted RBP27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 ICAM3P32942 547 aa27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 APOA5Q6Q788 366 aa27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 TCEANC2Q96MN5 208 aa27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 GAS2L1Q99501 681 aaPredicted RBP27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 NKX2-4Q9H2Z4 354 aa27.29■■□□□ 1.96
CDKN2A-214ENST00000579755 SPDYE3A6NKU9 549 aa27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 ZBTB43O43298 467 aa27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 PARNO95453 639 aaKnown RBP27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 SELPP16109 830 aa27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 EXOSC10Q01780 885 aaKnown RBP27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 CYFIP1Q7L576 1253 aa27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 RASEFQ8IZ41 740 aa27.28■■□□□ 1.96
CDKN2A-214ENST00000579755 H3BRB1 525 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 RABGGTBP53611 331 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 PTK7Q13308 1070 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 RTN1Q16799 776 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 ADCK5Q3MIX3 580 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 METTL7BQ6UX53 244 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 LRRC8DQ7L1W4 858 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 GIMAP8Q8ND71 665 aaPredicted RBP27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 USP26Q9BXU7 913 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 TUT1Q9H6E5 874 aaKnown RBP27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 EHMT1Q9H9B1 1298 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 SCN5AQ14524 2016 aa27.27■■□□□ 1.96
CDKN2A-214ENST00000579755 TRIP12Q14669 1992 aaPredicted RBP27.26■■□□□ 1.95
CDKN2A-214ENST00000579755 VWCEQ96DN2 955 aa27.26■■□□□ 1.95
CDKN2A-214ENST00000579755 C16orf70Q9BSU1 422 aa27.26■■□□□ 1.95
CDKN2A-214ENST00000579755 PCDHA11Q9Y5I1 949 aa27.26■■□□□ 1.95
CDKN2A-214ENST00000579755 LGALS2P05162 132 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 CKBP12277 381 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 CDHR1Q96JP9 859 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 CTAGE1Q96RT6 745 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 SLC9A7Q96T83 725 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 PRDM12Q9H4Q4 367 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 BCAS3Q9H6U6 928 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 BRPF3Q9ULD4 1205 aa27.25■■□□□ 1.95
CDKN2A-214ENST00000579755 YBX2Q9Y2T7 364 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms