RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 MAFGO15525 162 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 KPNA6O60684 536 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 CYP3A4P08684 503 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 ITGB5P18084 799 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.57
MKS1-208ENST00000579358 PTGS1P23219 599 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 HMGN5P82970 282 aaKnown RBP11.46□□□□□ -0.57
MKS1-208ENST00000579358 ARHGAP4P98171 946 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 BEX3Q00994 111 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 SEMA3FQ13275 785 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 LAMC2Q13753 1193 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 NEDD9Q14511 834 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 NPY5RQ15761 445 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 JAKMIP3Q5VZ66 844 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 SLC39A5Q6ZMH5 540 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 BLIDQ8IZY5 108 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 PPTC7Q8NI37 304 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 CRYGNQ8WXF5 182 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 SENP7Q9BQF6 1050 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 ALG1Q9BT22 464 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 SEZ6LQ9BYH1 1024 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 JADE2Q9NQC1 790 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 STARD7Q9NQZ5 370 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 POLR3EQ9NVU0 708 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 RTEL1Q9NZ71 1219 aa11.46□□□□□ -0.57
MKS1-208ENST00000579358 M0R2N6 131 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 EVI5O60447 810 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 JAK2O60674 1132 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 GGPS1O95749 300 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 MTMR1Q13613 665 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 CELF3Q5SZQ8 465 aaKnown RBP11.45□□□□□ -0.58
MKS1-208ENST00000579358 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
MKS1-208ENST00000579358 GIMAP8Q8ND71 665 aaPredicted RBP11.45□□□□□ -0.58
MKS1-208ENST00000579358 RASGRP4Q8TDF6 673 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 DPF3Q92784 378 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
MKS1-208ENST00000579358 MXRA8Q9BRK3 442 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 MCM3APO60318 1980 aa11.45□□□□□ -0.58
MKS1-208ENST00000579358 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
MKS1-208ENST00000579358 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
MKS1-208ENST00000579358 MMP3P08254 477 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
MKS1-208ENST00000579358 CIITAP33076 1130 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
MKS1-208ENST00000579358 RTP1P59025 263 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 PURAQ00577 322 aaKnown RBP11.44□□□□□ -0.58
MKS1-208ENST00000579358 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
MKS1-208ENST00000579358 DGKDQ16760 1214 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 METTL7BQ6UX53 244 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 CXCL17Q6UXB2 119 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 KRT25Q7Z3Z0 450 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 AFG1LQ8WV93 481 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 TMX3Q96JJ7 454 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 MLXIPQ9HAP2 919 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 KCNJ14Q9UNX9 436 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
MKS1-208ENST00000579358 MROH7Q68CQ1 1323 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 IGLV3-22A0A075B6J6 115 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 MEIS1O00470 390 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 KCNA2P16389 499 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 ZNF76P36508 570 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 USP11P51784 963 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 SP2Q02086 613 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 TRIM29Q14134 588 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 NONOQ15233 471 aaKnown RBP eCLIP11.43□□□□□ -0.58
MKS1-208ENST00000579358 HSDL1Q3SXM5 330 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 ANKRD33Q7Z3H0 272 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 SLC43A3Q8NBI5 491 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 TBCKQ8TEA7 893 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 SPATA33Q96N06 139 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 MTG1Q9BT17 334 aaPredicted RBP11.43□□□□□ -0.58
MKS1-208ENST00000579358 KCNH7Q9NS40 1196 aa11.43□□□□□ -0.58
MKS1-208ENST00000579358 NFASCO94856 1347 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 FAM86B1E9PN63 330 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 ARVCFO00192 962 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 DTNBO60941 627 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 MMP1P03956 469 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 MYL3P08590 195 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 FAM86B2P0C5J1 330 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 KRT2P35908 639 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 CDK7P50613 346 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 ITGA7Q13683 1181 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 TRIM60Q495X7 471 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
MKS1-208ENST00000579358 KRT40Q6A162 431 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 MOXD1Q6UVY6 613 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 CYFIP1Q7L576 1253 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 C7orf61Q8IZ16 206 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 FAM184AQ8NB25 1140 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 TOX2Q96NM4 488 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 KATNAL1Q9BW62 490 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms