RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 ZNF286BP0CG31 522 aa30.81■■■□□ 2.52
LINC00271-205ENST00000579339 TOB2Q14106 344 aaPredicted RBP30.81■■■□□ 2.52
LINC00271-205ENST00000579339 DGKDQ16760 1214 aa30.81■■■□□ 2.52
LINC00271-205ENST00000579339 HSDL1Q3SXM5 330 aa30.81■■■□□ 2.52
LINC00271-205ENST00000579339 SPATA33Q96N06 139 aa30.81■■■□□ 2.52
LINC00271-205ENST00000579339 CCDC196A0A1B0GTZ2 297 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 SPDYE3A6NKU9 549 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 PPFIA3O75145 1194 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 STAM2O75886 525 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 TGFB3P10600 412 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 CYP2C9P11712 490 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 CSF2RAP15509 400 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 NFRKBQ6P4R8 1299 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 LARP6Q9BRS8 491 aaKnown RBP30.8■■■□□ 2.52
LINC00271-205ENST00000579339 NOC4LQ9BVI4 516 aaKnown RBP30.8■■■□□ 2.52
LINC00271-205ENST00000579339 PCDHA6Q9UN73 950 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 PCDHA8Q9Y5H6 950 aa30.8■■■□□ 2.52
LINC00271-205ENST00000579339 MYH7BA7E2Y1 1941 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 ICAM3P32942 547 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 CCT2P78371 535 aaKnown RBP30.79■■■□□ 2.52
LINC00271-205ENST00000579339 PPP1R18Q6NYC8 613 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 PGBD1Q96JS3 809 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 TM6SF1Q9BZW5 370 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 MLXIPQ9HAP2 919 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 RIC8AQ9NPQ8 531 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 BARHL2Q9NY43 387 aa30.79■■■□□ 2.52
LINC00271-205ENST00000579339 SPATA31C2B4DYI2 1134 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 FIBPO43427 364 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 PDIA3P30101 505 aaKnown RBP30.78■■■□□ 2.52
LINC00271-205ENST00000579339 ADCY7P51828 1080 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 CCL23P55773 120 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 XRRA1Q6P2D8 792 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 TMEM199Q8N511 208 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 PHKBQ93100 1093 aa30.78■■■□□ 2.52
LINC00271-205ENST00000579339 NCOA5Q9HCD5 579 aaKnown RBP30.78■■■□□ 2.52
LINC00271-205ENST00000579339 LAMA2P24043 3122 aaKnown RBP30.78■■■□□ 2.52
LINC00271-205ENST00000579339 SMCO2A6NFE2 343 aa30.77■■■□□ 2.52
LINC00271-205ENST00000579339 PFKFB3Q16875 520 aaPredicted RBP30.77■■■□□ 2.52
LINC00271-205ENST00000579339 ALG1Q9BT22 464 aa30.77■■■□□ 2.52
LINC00271-205ENST00000579339 hCG_1984214I3L0E3 225 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 SUPT20HL2P0C7V6 817 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 ACRP10323 421 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 PSEN2P49810 448 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 EVCP57679 992 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 PPIGQ13427 754 aaKnown RBP eCLIP30.76■■■□□ 2.51
LINC00271-205ENST00000579339 CYFIP1Q7L576 1253 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 NLRX1Q86UT6 975 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 ZNF713Q8N859 430 aaPredicted RBP30.76■■■□□ 2.51
LINC00271-205ENST00000579339 RNPC3Q96LT9 517 aaKnown RBP30.76■■■□□ 2.51
LINC00271-205ENST00000579339 WNT8AQ9H1J5 351 aa30.76■■■□□ 2.51
LINC00271-205ENST00000579339 HOXD8P13378 290 aaPredicted RBP30.75■■■□□ 2.51
LINC00271-205ENST00000579339 SCG2P13521 617 aa30.75■■■□□ 2.51
LINC00271-205ENST00000579339 C16orf59Q7L2K0 433 aa30.75■■■□□ 2.51
LINC00271-205ENST00000579339 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.75■■■□□ 2.51
LINC00271-205ENST00000579339 PDRG1Q9NUG6 133 aa30.75■■■□□ 2.51
LINC00271-205ENST00000579339 TMEM260Q9NX78 707 aa30.75■■■□□ 2.51
LINC00271-205ENST00000579339 TELO2Q9Y4R8 837 aa30.75■■■□□ 2.51
LINC00271-205ENST00000579339 F2P00734 622 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 ITGB5P18084 799 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 PTPN11Q06124 597 aaPredicted RBP30.74■■■□□ 2.51
LINC00271-205ENST00000579339 NEDD9Q14511 834 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 MFSD10Q14728 455 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 NTRK3Q16288 839 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 PKN1Q16512 942 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 GDF6Q6KF10 455 aaPredicted RBP30.74■■■□□ 2.51
LINC00271-205ENST00000579339 SCLYQ96I15 445 aa30.74■■■□□ 2.51
LINC00271-205ENST00000579339 PRPF3O43395 683 aaKnown RBP30.73■■■□□ 2.51
LINC00271-205ENST00000579339 PPFIA4O75335 1185 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 SP4Q02446 784 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 KIAA0753Q2KHM9 967 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 METTL7BQ6UX53 244 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 SLC26A6Q9BXS9 759 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 EHMT1Q9H9B1 1298 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 HDAC6Q9UBN7 1215 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 NOD1Q9Y239 953 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 UBIAD1Q9Y5Z9 338 aa30.73■■■□□ 2.51
LINC00271-205ENST00000579339 NOP56O00567 594 aaKnown RBP30.72■■■□□ 2.51
LINC00271-205ENST00000579339 ADAMTS3O15072 1205 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 TMEM240Q5SV17 173 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 Q7L0L9 218 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 GPRASP2Q96D09 838 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 KATNAL1Q9BW62 490 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 ANO3Q9BYT9 981 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 PKD2L1Q9P0L9 805 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 DOCK5Q9H7D0 1870 aa30.72■■■□□ 2.51
LINC00271-205ENST00000579339 HAS3O00219 553 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 ATP9AO75110 1047 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 AKAP17AQ02040 695 aaKnown RBP30.71■■■□□ 2.51
LINC00271-205ENST00000579339 STK3Q13188 491 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 PTGISQ16647 500 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 ZNF365Q70YC5 407 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 SESTD1Q86VW0 696 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 C7orf31Q8N865 590 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 CTAGE1Q96RT6 745 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 C16orf70Q9BSU1 422 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 IL23AQ9NPF7 189 aa30.71■■■□□ 2.51
LINC00271-205ENST00000579339 IFNAR1P17181 557 aa30.7■■■□□ 2.51
LINC00271-205ENST00000579339 CLK2P49760 499 aaKnown RBP30.7■■■□□ 2.51
LINC00271-205ENST00000579339 JAKMIP3Q5VZ66 844 aa30.7■■■□□ 2.51
LINC00271-205ENST00000579339 GPR20Q99678 358 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms