RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ZSWIM5Q9P217 1185 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 MTUS1Q9ULD2 1270 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 INSL6Q9Y581 213 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 KIAA1217Q5T5P2 1943 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 BDP1A6H8Y1 2624 aa9.97□□□□□ -0.81
CASC3-206ENST00000579238 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.96□□□□□ -0.82
CASC3-206ENST00000579238 OPLAHO14841 1288 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 HOXD11P31277 338 aaPredicted RBP9.96□□□□□ -0.82
CASC3-206ENST00000579238 ZNF200P98182 395 aaPredicted RBP9.96□□□□□ -0.82
CASC3-206ENST00000579238 MBTPS1Q14703 1052 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 LEXMQ3ZCV2 418 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 CELF3Q5SZQ8 465 aaKnown RBP9.96□□□□□ -0.82
CASC3-206ENST00000579238 MYSM1Q5VVJ2 828 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 SAMD3Q8N6K7 520 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.82
CASC3-206ENST00000579238 PDCD2LQ9BRP1 358 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 AMNQ9BXJ7 453 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 EMSYQ7Z589 1322 aa9.96□□□□□ -0.82
CASC3-206ENST00000579238 BRWD1Q9NSI6 2320 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 PI4K2BG5E9Z4 385 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 RGS20O76081 388 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 AMHP03971 560 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 TGFB3P10600 412 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 MYCLP12524 364 aaPredicted RBP9.95□□□□□ -0.82
CASC3-206ENST00000579238 THPOP40225 353 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 HTRA4P83105 476 aaPredicted RBP9.95□□□□□ -0.82
CASC3-206ENST00000579238 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
CASC3-206ENST00000579238 HIC1Q14526 733 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 IMMTQ16891 758 aaKnown RBP9.95□□□□□ -0.82
CASC3-206ENST00000579238 HSDL1Q3SXM5 330 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 CWC27Q6UX04 472 aaKnown RBP9.95□□□□□ -0.82
CASC3-206ENST00000579238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.95□□□□□ -0.82
CASC3-206ENST00000579238 STOX1Q6ZVD7 989 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 SERINC5Q86VE9 423 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 VSIG10LQ86VR7 867 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 FBXO22Q8NEZ5 403 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 DBF4BQ8NFT6 615 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 MTMR8Q96EF0 704 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 SPATA33Q96N06 139 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 UBAC1Q9BSL1 405 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 DSCC1Q9BVC3 393 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 KRT23Q9C075 422 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 OSBPL3Q9H4L5 887 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 CNNM2Q9H8M5 875 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 C11orf16Q9NQ32 467 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 DIAPH3Q9NSV4 1193 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 CTNNA3Q9UI47 895 aa9.95□□□□□ -0.82
CASC3-206ENST00000579238 LAMA4Q16363 1823 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 KLRF2D3W0D1 207 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 HIP1O00291 1037 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 ZBTB5O15062 677 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 GGPS1O95749 300 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 UBA1P22314 1058 aaKnown RBP9.94□□□□□ -0.82
CASC3-206ENST00000579238 KCNA5P22460 613 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 PGM5Q15124 567 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 PTPROQ16827 1216 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 PLEKHG4Q58EX7 1191 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 IFIT1BQ5T764 474 aaKnown RBP9.94□□□□□ -0.82
CASC3-206ENST00000579238 FAM178BQ8IXR5 827 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 MYOCDQ8IZQ8 938 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 STAG2Q8N3U4 1231 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.94□□□□□ -0.82
CASC3-206ENST00000579238 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
CASC3-206ENST00000579238 MRPL38Q96DV4 380 aaKnown RBP9.94□□□□□ -0.82
CASC3-206ENST00000579238 SAMD11Q96NU1 681 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 C17orf80Q9BSJ5 609 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 C16orf70Q9BSU1 422 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 PCDHA1Q9Y5I3 950 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 MYH6P13533 1939 aa9.94□□□□□ -0.82
CASC3-206ENST00000579238 SIP14410 1827 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 C17orf102A2RUQ5 167 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 FAM86C2PA6NEL3 165 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 H3BRB1 525 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 GCOM1H8Y6P7 765 aaPredicted RBP9.93□□□□□ -0.82
CASC3-206ENST00000579238 SORBS3O60504 671 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 PPP1R11O60927 126 aaPredicted RBP9.93□□□□□ -0.82
CASC3-206ENST00000579238 CAND2O75155 1236 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 POLR2MP0CAP2 368 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 CCND2P30279 289 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 HOXA13P31271 388 aaPredicted RBP9.93□□□□□ -0.82
CASC3-206ENST00000579238 HOXC8P31273 242 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 SP2Q02086 613 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 TRAF1Q13077 416 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 SEC23AQ15436 765 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
CASC3-206ENST00000579238 EPC2Q52LR7 807 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 TIGD5Q53EQ6 642 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 SMC5Q8IY18 1101 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 GJD3Q8N144 294 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 IL31RAQ8NI17 732 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 SEPT8Q92599 483 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 ATP6V0A1Q93050 837 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 TUT1Q9H6E5 874 aaKnown RBP9.93□□□□□ -0.82
CASC3-206ENST00000579238 MLXIPQ9HAP2 919 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 MAD2L2Q9UI95 211 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms