RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 CDCA7Q9BWT1 371 aaPredicted RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 CDV3Q9UKY7 258 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.53□□□□□ -1.523e-7■□□□□ 10
NF1-219ENST00000579081 SYCP2Q9BX26 1530 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SGSM2O43147 1006 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 BNIP3LO60238 219 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 PIK3CAP42336 1068 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 HSPA13P48723 471 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 RCN2Q14257 317 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TMTC3Q6ZXV5 915 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 DPP9Q86TI2 863 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 PASD1Q8IV76 773 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 EXOC8Q8IYI6 725 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 NACC1Q96RE7 527 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ZBTB18Q99592 522 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 NDEL1Q9GZM8 345 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TROQ12816 1431 aaPredicted RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 CHUKO15111 745 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 KRT16P08779 473 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 POLGP54098 1239 aaPredicted RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 CCNA1P78396 465 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 RBM46Q8TBY0 533 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 SNX19Q92543 992 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TTC25Q96NG3 672 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 CAPN7Q9Y6W3 813 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 LRRD1A4D1F6 860 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SYNDIG1LA6NDD5 238 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 LRRIQ4A6NIV6 560 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 CREB3O43889 395 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ALDH1B1P30837 517 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 NSFP46459 744 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 CWF19L2Q2TBE0 894 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 TRIM60Q495X7 471 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.53□□□□□ -1.52
NF1-219ENST00000579081 ARHGEF1Q92888 912 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 ANKRD36BP1Q96IX9 119 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 MID2Q9UJV3 735 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SUGT1Q9Y2Z0 365 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SCINQ9Y6U3 715 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SYNMO15061 1565 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 BLMP54132 1417 aaPredicted RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 POC1B-GALNT4F8VUJ3 575 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 M0R2C6 588 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 CPP00450 1065 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 OSBPP22059 807 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 RPS6KB1P23443 525 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 MAGEA9P43362 315 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 YWHAHQ04917 246 aaPredicted RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 SLC9A5Q14940 896 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TRIM67Q6ZTA4 783 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 FASTKD5Q7L8L6 764 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 DNAAF3Q8N9W5 541 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TGFBRAP1Q8WUH2 860 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TRAIPQ9BWF2 469 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 USP26Q9BXU7 913 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 BLZF1Q9H2G9 400 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 RUSC2Q8N2Y8 1516 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ARHGEF10O15013 1369 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 PLEKHG3A1L390 1219 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 EYA2O00167 538 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 TRPA1O75762 1119 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 DLATP10515 647 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 OAS2P29728 719 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 ARL4AP40617 200 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SERPINB8P50452 374 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 IL9RQ01113 521 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 FLOT2Q14254 428 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 KCTD2Q14681 263 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ICE2Q659A1 982 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 NFATC2IPQ8NCF5 419 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ENOX1Q8TC92 643 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 TBC1D22AQ8WUA7 517 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 CHCHD3Q9NX63 227 aaKnown RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 SH3TC1Q8TE82 1336 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SMCO2A6NFE2 343 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SERPINB10P48595 397 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 ATN1P54259 1190 aaPredicted RBP5.53□□□□□ -1.52
NF1-219ENST00000579081 BPIFB4P59827 614 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 LAMC2Q13753 1193 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SPOPLQ6IQ16 392 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 EMBQ6PCB8 327 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 C2CD5Q86YS7 1000 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 SULF1Q8IWU6 871 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 PPM1KQ8N3J5 372 aa5.53□□□□□ -1.52
NF1-219ENST00000579081 LIN7AO14910 233 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 HLA-DPA1P20036 260 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 LONP1P36776 959 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 TFAP4Q01664 338 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 CTDSPL2Q05D32 466 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 TRMT10CQ7L0Y3 403 aaKnown RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 SZRD1Q7Z422 152 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 KSR1Q8IVT5 923 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 RASEFQ8IZ41 740 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 APPBP2Q92624 585 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 DCAF5Q96JK2 942 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PASKQ96RG2 1323 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.52□□□□□ -1.53
NF1-219ENST00000579081 SGK1O00141 431 aa5.52□□□□□ -1.53
NF1-219ENST00000579081 SNUPNO95149 360 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms