RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CDHR1Q96JP9 859 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 GDF15Q99988 308 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 ALG1Q9BT22 464 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 TRPV6Q9H1D0 765 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 PKD2L1Q9P0L9 805 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 CNTNAP5Q8WYK1 1306 aa7.5□□□□□ -1.21
TRAF4-213ENST00000578917 RBBP6Q7Z6E9 1792 aaKnown RBP7.49□□□□□ -1.21
TRAF4-213ENST00000578917 SPATA31C2B4DYI2 1134 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 KIAA0355O15063 1070 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 RGS20O76081 388 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 SEC24BO95487 1268 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 TIMP1P01033 207 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 MMP3P08254 477 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 IFNAR1P17181 557 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 XBP1P17861 261 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 BMP8BP34820 402 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 EVCP57679 992 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 MRPS9P82933 396 aaKnown RBP7.49□□□□□ -1.21
TRAF4-213ENST00000578917 SP2Q02086 613 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 FPGSQ05932 587 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 MTMR1Q13613 665 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 MYSM1Q5VVJ2 828 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 TEX2Q8IWB9 1127 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 TDHQ8IZJ6 230 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 TMEM199Q8N511 208 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 RETREG2Q8NC44 543 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 CCDC148Q8NFR7 591 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 PPTC7Q8NI37 304 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 PPP1R13LQ8WUF5 828 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 PGBD1Q96JS3 809 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 SDF4Q9BRK5 362 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 RNF26Q9BY78 433 aaPredicted RBP7.49□□□□□ -1.21
TRAF4-213ENST00000578917 AGXT2Q9BYV1 514 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 PPP1R12CQ9BZL4 782 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 ALDH8A1Q9H2A2 487 aaPredicted RBP7.49□□□□□ -1.21
TRAF4-213ENST00000578917 HIPK3Q9H422 1215 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 PDLIM7Q9NR12 457 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 TMEM260Q9NX78 707 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 TCEAL9Q9UHQ7 104 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 LAMA4Q16363 1823 aa7.49□□□□□ -1.21
TRAF4-213ENST00000578917 A0A1W2PPC1 479 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 MAFGO15525 162 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 DEXIO95424 95 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 ZNF286BP0CG31 522 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 UBA1P22314 1058 aaKnown RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 AK2P54819 239 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 PTGISQ16647 500 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 KIAA0753Q2KHM9 967 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 HSDL1Q3SXM5 330 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 UTP14CQ5TAP6 766 aaKnown RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 NFRKBQ6P4R8 1299 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 FAM126BQ8IXS8 530 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 REXO1Q8N1G1 1221 aaKnown RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 WASF1Q92558 559 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 GLG1Q92896 1179 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 EMID1Q96A84 441 aaPredicted RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 INPP4AQ96PE3 977 aaPredicted RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 KATNAL1Q9BW62 490 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 ANO3Q9BYT9 981 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 SH3GLB2Q9NR46 395 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 TRMT13Q9NUP7 481 aaKnown RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 VPS54Q9P1Q0 977 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 BAZ2BQ9UIF8 2168 aaKnown RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 TPCN1Q9ULQ1 816 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
TRAF4-213ENST00000578917 PARP14Q460N5 1801 aa7.48□□□□□ -1.21
TRAF4-213ENST00000578917 SMCHD1A6NHR9 2005 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 H3BRB1 525 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 B4GALT4O60513 344 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 PFKFB2O60825 505 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 CYP2C9P11712 490 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 ITGB5P18084 799 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 ICAM3P32942 547 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 CYP2C18P33260 490 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 PSEN2P49810 448 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 CCL23P55773 120 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 PTPN11Q06124 597 aaPredicted RBP7.47□□□□□ -1.21
TRAF4-213ENST00000578917 PPIGQ13427 754 aaKnown RBP eCLIP7.47□□□□□ -1.217e-15■■□□□ 13
TRAF4-213ENST00000578917 BFSP2Q13515 415 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 TRIM29Q14134 588 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 MFSD10Q14728 455 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 NTRK3Q16288 839 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 PKN1Q16512 942 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 CEP55Q53EZ4 464 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 MFSD5Q6N075 450 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 TYW1BQ6NUM6 668 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 METTL7BQ6UX53 244 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 RPUSD2Q8IZ73 545 aaKnown RBP7.47□□□□□ -1.21
TRAF4-213ENST00000578917 CCDC155Q8N6L0 562 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 NECAB1Q8N987 351 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 SLC43A3Q8NBI5 491 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 SENP7Q9BQF6 1050 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 MXRA8Q9BRK3 442 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 C22orf23Q9BZE7 217 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 FTOQ9C0B1 505 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRAF4-213ENST00000578917 ZMYND12Q9H0C1 365 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 TUT1Q9H6E5 874 aaKnown RBP7.47□□□□□ -1.21
TRAF4-213ENST00000578917 AZI2Q9H6S1 392 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms