RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 PLA2G4DQ86XP0 818 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 FBXO16Q8IX29 292 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 IL31RAQ8NI17 732 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 RTEL1Q9NZ71 1219 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
CDK5RAP3-210ENST00000578733 MEIS1O00470 390 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 LAD1O00515 517 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TBX3O15119 743 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MSCO60682 206 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 INHAP05111 366 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 AKR1A1P14550 325 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CNGA1P29973 690 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ICAM3P32942 547 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 NEDD9Q14511 834 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PRR16Q569H4 304 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 EARS2Q5JPH6 523 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SDF4Q9BRK5 362 aa12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-210ENST00000578733 BRCA2P51587 3418 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FAM205CA6NFA0 338 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FAM86B1E9PN63 330 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TDP2O95551 362 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FAM86B2P0C5J1 330 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TXNP10599 105 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MCM7P33993 719 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CACNB2Q08289 660 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PKP1Q13835 747 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CALCRLQ16602 461 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TMEM266Q2M3C6 531 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MBOAT7Q96N66 472 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SENP7Q9BQF6 1050 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZNF577Q9BSK1 485 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RAB34Q9BZG1 259 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 WDR11Q9BZH6 1224 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SPC25Q9HBM1 224 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TBC1D22BQ9NU19 505 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SEPT4O43236 478 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 NFASCO94856 1347 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 IGHA2P01877 340 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CYBAP13498 195 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ITGB5P18084 799 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KRT85P78386 507 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 STK38Q15208 465 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZNF174Q15697 407 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CCDC144BQ3MJ40 725 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TEKT3Q9BXF9 490 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
CDK5RAP3-210ENST00000578733 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 GAS7O60861 476 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 GH1P01241 217 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZNF865P0CJ78 1059 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RARBP10826 455 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 EN2P19622 333 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SF3A1Q15459 793 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MAP3K21Q5TCX8 1036 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ANO1Q5XXA6 986 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TAPT1Q6NXT6 567 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DHX37Q8IY37 1157 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SH3TC2Q8TF17 1288 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RIT2Q99578 217 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 Q9Y3F1 56 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PCDHB6Q9Y5E3 794 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
CDK5RAP3-210ENST00000578733 MSH4O15457 936 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 SLC37A4O43826 429 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 RGS20O76081 388 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 ARP10275 920 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 CAPN2P17655 700 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 PRPHP41219 470 aa12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 TOB1P50616 345 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-210ENST00000578733 KRT76Q01546 638 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms