RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 AMNQ9BXJ7 453 aa24.45■■□□□ 1.5
TSEN54-205ENST00000578415 ERVK-21P61565 698 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 IMMTQ16891 758 aaKnown RBP24.44■■□□□ 1.5
TSEN54-205ENST00000578415 MTMR8Q96EF0 704 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 PDCD2LQ9BRP1 358 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 EPHX3Q9H6B9 360 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 SUGCTQ9HAC7 445 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 LMCD1Q9NZU5 365 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 MTUS1Q9ULD2 1270 aa24.44■■□□□ 1.5
TSEN54-205ENST00000578415 LINC01553A4QN01 128 aa24.43■■□□□ 1.5
TSEN54-205ENST00000578415 PLA2G5P39877 138 aa24.43■■□□□ 1.5
TSEN54-205ENST00000578415 HSDL1Q3SXM5 330 aa24.43■■□□□ 1.5
TSEN54-205ENST00000578415 MYSM1Q5VVJ2 828 aa24.43■■□□□ 1.5
TSEN54-205ENST00000578415 STOX1Q6ZVD7 989 aa24.43■■□□□ 1.5
TSEN54-205ENST00000578415 TGS1Q96RS0 853 aaKnown RBP24.43■■□□□ 1.5
TSEN54-205ENST00000578415 KRT23Q9C075 422 aa24.43■■□□□ 1.5
TSEN54-205ENST00000578415 SORBS3O60504 671 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 EFCAB14O75071 495 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 PPFIA4O75335 1185 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 MYCLP12524 364 aaPredicted RBP24.42■■□□□ 1.5
TSEN54-205ENST00000578415 NUCB1Q02818 461 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 IKBKEQ14164 716 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 CELF3Q5SZQ8 465 aaKnown RBP24.42■■□□□ 1.5
TSEN54-205ENST00000578415 IL31RAQ8NI17 732 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 UBAC1Q9BSL1 405 aa24.42■■□□□ 1.5
TSEN54-205ENST00000578415 KLRF2D3W0D1 207 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 HOXA13P31271 388 aaPredicted RBP24.41■■□□□ 1.5
TSEN54-205ENST00000578415 SP2Q02086 613 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 MKRN4PQ13434 485 aaPredicted RBP24.41■■□□□ 1.5
TSEN54-205ENST00000578415 SEC23AQ15436 765 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 SLC35G1Q2M3R5 365 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 IFIT1BQ5T764 474 aaKnown RBP24.41■■□□□ 1.5
TSEN54-205ENST00000578415 FAM117BQ6P1L5 589 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 VSIG10LQ86VR7 867 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 SPATA33Q96N06 139 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 IL25Q9H293 177 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 CNNM2Q9H8M5 875 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 MAD2L2Q9UI95 211 aa24.41■■□□□ 1.5
TSEN54-205ENST00000578415 HIP1O00291 1037 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 ZBTB5O15062 677 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 LGR5O75473 907 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 GGPS1O95749 300 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 IGHDP01880 384 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 UBA1P22314 1058 aaKnown RBP24.4■■□□□ 1.5
TSEN54-205ENST00000578415 PGM5Q15124 567 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.4■■□□□ 1.5
TSEN54-205ENST00000578415 KHSRPQ92945 711 aaKnown RBP eCLIP24.4■■□□□ 1.5
TSEN54-205ENST00000578415 C16orf70Q9BSU1 422 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 RWDD1Q9H446 243 aaPredicted RBP24.4■■□□□ 1.5
TSEN54-205ENST00000578415 MAP3K20Q9NYL2 800 aaKnown RBP24.4■■□□□ 1.5
TSEN54-205ENST00000578415 CTNNA3Q9UI47 895 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 PCDHA1Q9Y5I3 950 aa24.4■■□□□ 1.5
TSEN54-205ENST00000578415 BRWD1Q9NSI6 2320 aa24.39■■□□□ 1.5
TSEN54-205ENST00000578415 AAMPQ13685 434 aa24.39■■□□□ 1.49
TSEN54-205ENST00000578415 KCNV1Q6PIU1 500 aa24.39■■□□□ 1.49
TSEN54-205ENST00000578415 SERINC5Q86VE9 423 aa24.39■■□□□ 1.49
TSEN54-205ENST00000578415 GPKOWQ92917 476 aaPredicted RBP eCLIP24.39■■□□□ 1.49
TSEN54-205ENST00000578415 ZFP91Q96JP5 570 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-205ENST00000578415 LRFN3Q9BTN0 628 aa24.39■■□□□ 1.49
TSEN54-205ENST00000578415 PALM3A6NDB9 673 aaPredicted RBP24.38■■□□□ 1.49
TSEN54-205ENST00000578415 CYB5R4Q7L1T6 521 aa24.38■■□□□ 1.49
TSEN54-205ENST00000578415 DBF4BQ8NFT6 615 aa24.38■■□□□ 1.49
TSEN54-205ENST00000578415 FAM122AQ96E09 287 aa24.38■■□□□ 1.49
TSEN54-205ENST00000578415 EMSYQ7Z589 1322 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 TGFB3P10600 412 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 HOXC8P31273 242 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 THPOP40225 353 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 SAMD3Q8N6K7 520 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 C17orf80Q9BSJ5 609 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 UBE2ZQ9H832 354 aaPredicted RBP24.37■■□□□ 1.49
TSEN54-205ENST00000578415 CD320Q9NPF0 282 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 MYH6P13533 1939 aa24.37■■□□□ 1.49
TSEN54-205ENST00000578415 RSPH10B2B2RC85 870 aa24.36■■□□□ 1.49
TSEN54-205ENST00000578415 RSPH10BP0C881 870 aa24.36■■□□□ 1.49
TSEN54-205ENST00000578415 HOMER1Q86YM7 354 aa24.36■■□□□ 1.49
TSEN54-205ENST00000578415 BCAS3Q9H6U6 928 aa24.36■■□□□ 1.49
TSEN54-205ENST00000578415 INSL6Q9Y581 213 aa24.36■■□□□ 1.49
TSEN54-205ENST00000578415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.35■■□□□ 1.49
TSEN54-205ENST00000578415 GCOM1H8Y6P7 765 aaPredicted RBP24.35■■□□□ 1.49
TSEN54-205ENST00000578415 POLR2MP0CAP2 368 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 CCND2P30279 289 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 HTRA4P83105 476 aaPredicted RBP24.35■■□□□ 1.49
TSEN54-205ENST00000578415 PLEKHG4Q58EX7 1191 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 MYOCDQ8IZQ8 938 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 SP7Q8TDD2 431 aaPredicted RBP24.35■■□□□ 1.49
TSEN54-205ENST00000578415 PIGSQ96S52 555 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 RIOX1Q9H6W3 641 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 C11orf16Q9NQ32 467 aa24.35■■□□□ 1.49
TSEN54-205ENST00000578415 C17orf102A2RUQ5 167 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 H3BRB1 525 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 CYTH3O43739 400 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 AMHP03971 560 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 GRM4Q14833 912 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 TMEM31Q5JXX7 168 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 FCHSD1Q86WN1 690 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 FBXO22Q8NEZ5 403 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 ATP6V0A1Q93050 837 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 OSBPL7Q9BZF2 842 aa24.34■■□□□ 1.49
TSEN54-205ENST00000578415 TUT1Q9H6E5 874 aaKnown RBP24.34■■□□□ 1.49
TSEN54-205ENST00000578415 MLXIPQ9HAP2 919 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms