RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 HOXD8P13378 290 aaPredicted RBP13.73□□□□□ -0.21
CDH8-202ENST00000577228 GHRHRQ02643 423 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 IKBKEQ14164 716 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 TCTN1Q2MV58 587 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 TRIM71Q2Q1W2 868 aaKnown RBP13.73□□□□□ -0.21
CDH8-202ENST00000577228 KCNV1Q6PIU1 500 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 RAD9AQ99638 391 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 PCDHA1Q9Y5I3 950 aa13.73□□□□□ -0.21
CDH8-202ENST00000577228 ZBTB5O15062 677 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 PPP1R11O60927 126 aaPredicted RBP13.72□□□□□ -0.21
CDH8-202ENST00000577228 PPFIA4O75335 1185 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 RGS20O76081 388 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 GGPS1O95749 300 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
CDH8-202ENST00000577228 ZNF200P98182 395 aaPredicted RBP13.72□□□□□ -0.21
CDH8-202ENST00000577228 CELF3Q5SZQ8 465 aaKnown RBP13.72□□□□□ -0.21
CDH8-202ENST00000577228 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 MYSM1Q5VVJ2 828 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 FAM117BQ6P1L5 589 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 TRAF7Q6Q0C0 670 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 WNT8BQ93098 351 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
CDH8-202ENST00000577228 MAP3K20Q9NYL2 800 aaKnown RBP13.72□□□□□ -0.21
CDH8-202ENST00000577228 LMCD1Q9NZU5 365 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 MTUS1Q9ULD2 1270 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 TRANK1O15050 2925 aa13.72□□□□□ -0.21
CDH8-202ENST00000577228 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 LGR5O75473 907 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 IGHDP01880 384 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 UBA1P22314 1058 aaKnown RBP13.71□□□□□ -0.21
CDH8-202ENST00000577228 CCND2P30279 289 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 ERVK-21P61565 698 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 MBTPS1Q14703 1052 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 PGM5Q15124 567 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 SEC23AQ15436 765 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 HSDL1Q3SXM5 330 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 STOX1Q6ZVD7 989 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 HOMER1Q86YM7 354 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 MAD2L2Q9UI95 211 aa13.71□□□□□ -0.21
CDH8-202ENST00000577228 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 PALM3A6NDB9 673 aaPredicted RBP13.7□□□□□ -0.22
CDH8-202ENST00000577228 GCOM1H8Y6P7 765 aaPredicted RBP13.7□□□□□ -0.22
CDH8-202ENST00000577228 POLR2MP0CAP2 368 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 THPOP40225 353 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 TRAF1Q13077 416 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 HIC1Q14526 733 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 SERINC5Q86VE9 423 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 FCHSD1Q86WN1 690 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 SUGCTQ9HAC7 445 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
CDH8-202ENST00000577228 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 C17orf102A2RUQ5 167 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 AMHP03971 560 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 TGFB3P10600 412 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 PLA2G5P39877 138 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 SP2Q02086 613 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 TRDNQ13061 729 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 GRM4Q14833 912 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDH8-202ENST00000577228 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CDH8-202ENST00000577228 FAM122AQ96E09 287 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CDH8-202ENST00000577228 PIGSQ96S52 555 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 IL25Q9H293 177 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 INSL6Q9Y581 213 aa13.69□□□□□ -0.22
CDH8-202ENST00000577228 REV3LO60673 3130 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 SLC35G1Q2M3R5 365 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 MYOCDQ8IZQ8 938 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 FBXO22Q8NEZ5 403 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 DBF4BQ8NFT6 615 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 ATP6V0A1Q93050 837 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 EPHX3Q9H6B9 360 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 RIOX1Q9H6W3 641 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 UBE2ZQ9H832 354 aaPredicted RBP13.68□□□□□ -0.22
CDH8-202ENST00000577228 BRWD1Q9NSI6 2320 aa13.68□□□□□ -0.22
CDH8-202ENST00000577228 SIP14410 1827 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 ERICH2A1L162 156 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 H3BRB1 525 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
CDH8-202ENST00000577228 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
CDH8-202ENST00000577228 LGALS2P05162 132 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 SMIM10L2AP0DMW4 78 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 SMIM10L2BP0DMW5 78 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
CDH8-202ENST00000577228 GNPTABQ3T906 1256 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 SEPT8Q92599 483 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 C17orf80Q9BSJ5 609 aa13.67□□□□□ -0.22
CDH8-202ENST00000577228 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
CDH8-202ENST00000577228 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 TREHO43280 583 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 256.6 ms