RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 GUCY1A3Q02108 690 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 HABP4Q5JVS0 413 aaKnown RBP7.9□□□□□ -1.14
NUP88-213ENST00000576862 OTOP3Q7RTS5 596 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 PCDH19Q8TAB3 1148 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 SIGLEC10Q96LC7 697 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 KCNJ15Q99712 375 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 ALG1Q9BT22 464 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 RNF38Q9H0F5 515 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 TRIM39Q9HCM9 518 aa7.9□□□□□ -1.14
NUP88-213ENST00000576862 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 FAM47E-STBD1D6RA91 191 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 PLD2O14939 933 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 EFCAB14O75071 495 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 NCAM1P13591 858 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 PAK1Q13153 545 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 CHRNA2Q15822 529 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 KCNA10Q16322 511 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 FGD2Q7Z6J4 655 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 NOP9Q86U38 636 aaKnown RBP7.89□□□□□ -1.15
NUP88-213ENST00000576862 AMIGO3Q86WK7 504 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 MIB1Q86YT6 1006 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 SLC6A20Q9NP91 592 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 SFMBT1Q9UHJ3 866 aa7.89□□□□□ -1.15
NUP88-213ENST00000576862 TCRBV5S2A0A599 114 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 NKRFO15226 690 aaKnown RBP eCLIP7.88□□□□□ -1.15
NUP88-213ENST00000576862 RASGRP1O95267 797 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 COL6A2P12110 1019 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 LINC00310P59036 64 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 TARBP2Q15633 366 aaKnown RBP7.88□□□□□ -1.15
NUP88-213ENST00000576862 BRAPQ7Z569 592 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 ANKLE2Q86XL3 938 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 PANK1Q8TE04 598 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 CPA5Q8WXQ8 436 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 SMOC1Q9H4F8 434 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 TBX22Q9Y458 520 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 KCTD3Q9Y597 815 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 PCDHB4Q9Y5E5 795 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 IRAK3Q9Y616 596 aa7.88□□□□□ -1.15
NUP88-213ENST00000576862 TCRBV5S4A2TA0A5A2 114 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 ASMTLO95671 621 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 GNAT1P11488 350 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 PFKLP17858 780 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 PI3P19957 117 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 ARRDC4Q8NCT1 418 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 FANCLQ9NW38 375 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 MYOTQ9UBF9 498 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 ASH2LQ9UBL3 628 aa7.87□□□□□ -1.15
NUP88-213ENST00000576862 CNOT6Q9ULM6 557 aaKnown RBP7.87□□□□□ -1.15
NUP88-213ENST00000576862 DBX1A6NMT0 343 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 KRIT1O00522 736 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 SLC27A2O14975 620 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 CKMP06732 381 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 KCNA6P17658 529 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 NAT1P18440 290 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 LIMS1P48059 325 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 CACNB2Q08289 660 aaPredicted RBP7.86□□□□□ -1.15
NUP88-213ENST00000576862 SPIRE1Q08AE8 756 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 FNDC3BQ53EP0 1204 aaKnown RBP7.86□□□□□ -1.15
NUP88-213ENST00000576862 CYP4F22Q6NT55 531 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 GIMAP6Q6P9H5 292 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 ETV3LQ6ZN32 361 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 B3GNT8Q7Z7M8 397 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 FAM129CQ86XR2 697 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 FAM126BQ8IXS8 530 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 RBM12BQ8IXT5 1001 aaKnown RBP7.86□□□□□ -1.15
NUP88-213ENST00000576862 UHMK1Q8TAS1 419 aaKnown RBP7.86□□□□□ -1.15
NUP88-213ENST00000576862 CBLCQ9ULV8 474 aa7.86□□□□□ -1.15
NUP88-213ENST00000576862 TCRBV16S1A1N1A0A5B0 115 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 C8BP07358 591 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 SRGAP2CP0DJJ0 459 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 PYGMP11217 842 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 CFPP27918 469 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 FOXO4P98177 505 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 TKFCQ3LXA3 575 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 HOMER1Q86YM7 354 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 C1QL4Q86Z23 238 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 NLGN1Q8N2Q7 840 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 FAM26EQ8N5C1 309 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 PHOSPHO1Q8TCT1 267 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 SH3RF2Q8TEC5 729 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 CLEC4DQ8WXI8 215 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 FBXW5Q969U6 566 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 MAGEB10Q96LZ2 347 aaPredicted RBP7.85□□□□□ -1.15
NUP88-213ENST00000576862 SYT3Q9BQG1 590 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 TELO2Q9Y4R8 837 aa7.85□□□□□ -1.15
NUP88-213ENST00000576862 LTFP02788 710 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
NUP88-213ENST00000576862 AMY2AP04746 511 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 AMY2BP19961 511 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 ABHD17CQ6PCB6 329 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 C16orf59Q7L2K0 433 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 ZC3H7AQ8IWR0 971 aaKnown RBP7.84□□□□□ -1.15
NUP88-213ENST00000576862 SMARCC2Q8TAQ2 1214 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 APPBP2Q92624 585 aa7.84□□□□□ -1.15
NUP88-213ENST00000576862 CCDC66A2RUB6 948 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 MAFKO60675 156 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 RFPL3O75679 317 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 DNAJC8O75937 253 aaPredicted RBP7.83□□□□□ -1.16
NUP88-213ENST00000576862 YBX3P16989 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms