RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SLC4A4Q9Y6R1 1079 aa7.48□□□□□ -1.21
NUP88-212ENST00000576708 EFSO43281 561 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
NUP88-212ENST00000576708 COL6A1P12109 1028 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 FGFR3P22607 806 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 CNGA1P29973 690 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 GMPRP36959 345 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 EIF1AXP47813 144 aaKnown RBP7.47□□□□□ -1.21
NUP88-212ENST00000576708 CCNA1P78396 465 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 CTBSQ01459 385 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 ATP2B2Q01814 1243 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 GRB14Q14449 540 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 PLS1Q14651 629 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 COG2Q14746 738 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 UBE3CQ15386 1083 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 LRRC26Q2I0M4 334 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 PRAMEF19Q5SWL8 479 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 ANO1Q5XXA6 986 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 CTR9Q6PD62 1173 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 TMEM179Q6ZVK1 233 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 GPR152Q8TDT2 470 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 GDF15Q99988 308 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.47□□□□□ -1.21
NUP88-212ENST00000576708 ATP8A2Q9NTI2 1148 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 FBXO28Q9NVF7 368 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 SWAP70Q9UH65 585 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 PHF24Q9UPV7 400 aa7.47□□□□□ -1.21
NUP88-212ENST00000576708 BAZ2AQ9UIF9 1905 aaKnown RBP7.46□□□□□ -1.21
NUP88-212ENST00000576708 TRIOBPQ9H2D6 2365 aa7.46□□□□□ -1.21
NUP88-212ENST00000576708 COBLO75128 1261 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 FLOT1O75955 427 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 FAM13AO94988 1023 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 EEF2P13639 858 aaKnown RBP7.46□□□□□ -1.22
NUP88-212ENST00000576708 CAPN2P17655 700 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 ERCC3P19447 782 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 GRNP28799 593 aaKnown RBP7.46□□□□□ -1.22
NUP88-212ENST00000576708 ADORA2AP29274 412 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 MAGEA10P43363 369 aaPredicted RBP7.46□□□□□ -1.22
NUP88-212ENST00000576708 ARSDP51689 593 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 KRT76Q01546 638 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 ICA1Q05084 483 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 ECM1Q16610 540 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 MFSD14CQ5VZR4 134 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 C16orf86Q6ZW13 317 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 DPP9Q86TI2 863 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 NCAPG2Q86XI2 1143 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 CMTR1Q8N1G2 835 aaKnown RBP7.46□□□□□ -1.22
NUP88-212ENST00000576708 CNTNAP3BQ96NU0 1288 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 STRBPQ96SI9 672 aaKnown RBP7.46□□□□□ -1.22
NUP88-212ENST00000576708 CNTNAP3Q9BZ76 1288 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 SPATC1LQ9H0A9 340 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 GZF1Q9H116 711 aaPredicted RBP7.46□□□□□ -1.22
NUP88-212ENST00000576708 HOXC10Q9NYD6 342 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 MARK1Q9P0L2 795 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 TMX2Q9Y320 296 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 CEP290O15078 2479 aa7.46□□□□□ -1.22
NUP88-212ENST00000576708 RLFQ13129 1914 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 GSG1L2A8MUP6 293 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 MINDY4BA8MYZ0 360 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 IGHA2P01877 340 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 HOXC6P09630 235 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 MX2P20592 715 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 TMEM132BQ14DG7 1078 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 FAM83BQ5T0W9 1011 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 GJC2Q5T442 439 aaPredicted RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 ZSCAN25Q6NSZ9 544 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 RAB44Q7Z6P3 723 aaPredicted RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 OTUD7AQ8TE49 926 aaPredicted RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 EDEM1Q92611 657 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 OSBP2Q969R2 916 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 NUP88Q99567 741 aaPredicted RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 SENP6Q9GZR1 1112 aaPredicted RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 CHMP4BQ9H444 224 aaKnown RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 DCTPP1Q9H773 170 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 VCPKMTQ9H867 229 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 ECHDC1Q9NTX5 307 aa7.45□□□□□ -1.22
NUP88-212ENST00000576708 DDX20Q9UHI6 824 aaKnown RBP7.45□□□□□ -1.22
NUP88-212ENST00000576708 A0A0G2JMZ2 1700 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 M0R2C6 588 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 C2CD2LO14523 706 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 WDR46O15213 610 aaKnown RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 RNF113AO15541 343 aaKnown RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 PRDM1O75626 825 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 PGK2P07205 417 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 CYBAP13498 195 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 NPR3P17342 541 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 ARHGAP4P98171 946 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 Q7L0L9 218 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 AMOTL1Q8IY63 956 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 KBTBD3Q8NAB2 608 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 SHCBP1Q8NEM2 672 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 LPAR1Q92633 364 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 CHMP4CQ96CF2 233 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 CCDC17Q96LX7 622 aa7.44□□□□□ -1.22
NUP88-212ENST00000576708 SEC62Q99442 399 aaKnown RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 SLC30A3Q99726 388 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms